Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2494 244 2e-59 seq2400 134 3e-26 >seq2494 Length=11727 Score = 244 bits (270), Expect = 2e-59 Identities = 909/1419 (64%), Gaps = 58/1419 (4%) Strand=Plus/Minus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| | ||||| ||| || ||| | || | || |||| | || | ||| || || Sbjct 3133 CATGTTGTCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAAC 3074 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 || || || |||| ||||| | | | ||| | ||| || ||| |||| |||| || Sbjct 3073 CTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCA 3014 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 |||||||||||||||||||| | ||| || || |||||||| ||||||| |||||| Sbjct 3013 TTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACT 2954 Query 221245 GTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACAGTGTCCTCC 221304 |||||| | ||| ||||| | | |||| || |||||| || Sbjct 2953 GTTGCGGACGCCGTGCTCCTTGATCTTCAGACGGAGCGAGTCCCAGTCCCA--------- 2903 Query 221305 CAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGACACCGGACT 221364 |||||| | |||||| ||| Sbjct 2902 CAGGTCAGACGGCTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGA 2843 Query 221365 CCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGC 221424 || || |||| | | |||| || | | | |||| || |||| ||| || || || Sbjct 2842 GCCCTCATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGC 2783 Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAG-TCTCTTGGCCTCGGGAGAAGTGA 221483 ||||||||||||||||||||||| ||||||||| || | | |||||||| || | Sbjct 2782 GGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGT-GCCTCGGGCGACTCAA 2724 Query 221484 AGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCC 221543 ||||||| |||||| | | || | || ||||| ||||| || || | ||| || || | Sbjct 2723 AGGGCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGAC 2664 Query 221544 TGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGAT 221603 ||| | | ||||| | || || |||||||| || ||||||| || | Sbjct 2663 GGTGGCGCATGTTGCTGTTCTCGGCCTCCGGCACGGGGTAGTAGTTGACATC------AA 2610 Query 221604 TGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCA 221663 || || ||||||| || ||| || || || | | || ||| | || | | Sbjct 2609 TGATGCGGTTCAGGTTGCGGAC---AAGCAGCTGTGCAACCTCGTGGAGCTT---CTTGA 2556 Query 221664 ACTCG-CCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTA 221722 | ||| || | |||| | | || ||||||| || || | | || ||||| Sbjct 2555 AGTCGTACGTC-TCGTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTG 2497 Query 221723 CACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGC 221780 ||||| || ||||| ||| | || | |||| | ||||| || || | |||| || Sbjct 2496 CACACAGCAACCTCATCC--GGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGC 2439 Query 221781 ACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAG-CGTCCTTGTAGAGC 221839 |||||| || |||| || || || |||||| || ||| ||||||||||||| Sbjct 2438 TGCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGTT-ACAGTGGTCCTTGTAGAGC 2380 Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG-TTCTCTGGC 221898 || || ||| ||| |||||| ||||||| | |||| || |||||| |||| ||| Sbjct 2379 ATGAACGGATTGCCCGTCTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCT-GGGC 2321 Query 221899 GCTCACCGTCCT-----CTTGA-CTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 | ||| | | | || || | | |||| ||| |||||| || || Sbjct 2320 CTTGACCTTTTTGCGGCCACGACCTTCGCGCTCGTACTTCTCATAC-------AGGGC-- 2270 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 ||||||| || ||||| | || |||| || |||||| | ||| |||||||| | Sbjct 2269 CTCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGT 2210 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||| | ||| | | |||| || |||||| || || |||||||| |||||| | || Sbjct 2209 CCACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAA 2150 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 ||||| | | || ||||||| ||| | |||||| | ||| || | |||||||| Sbjct 2149 CAGATCGCGAGCACGAATCTCCTCCTTGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAA 2090 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 | ||||| ||||| ||||| || |||| | | |||||| || |||||||| || || Sbjct 2089 GACATCAGCATGCCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCC 2030 Query 222193 CTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252 ||| ||||| | || |||| ||| || || | || | | || ||||| Sbjct 2029 CTGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTGGA 1970 Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC----A 222308 ||||| ||||| |||||| | ||| |||| || ||| || ||| | Sbjct 1969 CGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCCC---GGATAC-GGTGGACGTTGA 1914 Query 222309 TGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368 ||| || ||||| || || ||||||||||| ||| ||||||| ||||| ||| | Sbjct 1913 GGCCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATAC 1854 Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGGTG 222427 |||| || ||| ||||| | || || || || || || ||||| || | | |||| Sbjct 1853 CCTCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTGTGGT- 1795 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 | | |||||| || || || || ||| || || ||| Sbjct 1794 GTGCCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAG 1756 >seq2400 Length=47555 Score = 134 bits (148), Expect = 3e-26 Identities = 325/495 (66%), Gaps = 17/495 (3%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 ||||| | ||||||||| ||| | | | | | || |||| |||| ||||| || || Sbjct 7453 TGGGCTCTCAAGTGGATCT-CAGACCGCGAGTCCACCTTTGCTCAGCGCCTGGTCGCTTT 7511 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||| ||||||||||||||||| ||||||||| | || | ||||||||||||| ||| | Sbjct 7512 TGCCGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTTCTCTTCCATCTTCTGGCTGAAGAA 7571 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || ||||| || ||| ||| ||||||||||| || | |||||||| || Sbjct 7572 GCGCGGCCTGATGCCTGGCCTGACCTTCTCCAACGAGCTTATTTCTCGTGACGAGGGCCT 7631 Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC---- 26068 |||| || || || |||||||| | | | || || | |||| | | Sbjct 7632 GCACACCGACTTCGCTTGCCTGCTGTTCTC---TCATCTG----AAGAACCGCCCCAGCA 7684 Query 26069 AAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128 | |||| || | || ||| || ||||| |||| ||| ||||||| | Sbjct 7685 AGGAGATGATCCAGGAGATAATCGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTCACCG 7744 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188 | ||||||||| || |||||||| || |||||||||| Sbjct 7745 AGGCCCTTCCCTGCGCTCTGCTCGGCATGAACTCCACACTCATGAAGCAGTACATTGAGT 7804 Query 26189 ATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAA 26246 || ||||||| || ||| |||| || || | | | ||| || | | || Sbjct 7805 TCGTTGCCGACCGCCTTCTGGTTGCC--CTCGGCAATGATAAGGTGTACCGTTCCACCAA 7862 Query 26247 CCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAG 26306 ||| |||||||| ||||| ||||| || ||| || |||||||||||||| || ||| | Sbjct 7863 CCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCG 7922 Query 26307 GGTCGGCGACTATCA 26321 ||||| ||||| || Sbjct 7923 TGTCGGTGACTACCA 7937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928813602425280