Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2494 156 4e-33 seq2379 105 6e-18 seq1920 98.7 9e-16 >seq2494 Length=11727 Score = 156 bits (172), Expect = 4e-33 Identities = 678/1050 (65%), Gaps = 57/1050 (5%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 |||||||| || || |||| || || || ||| |||||| ||| | ||||| || Sbjct 3075 ACCTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAG 3016 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 |||||||||| ||||| ||||| | ||| | ||| || |||||| |||||||| ||| Sbjct 3015 CATTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGA 2956 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTT--GAGCGACGACCAGTCCCACAAAT 138685 || || | ||||| |||||| ||| |||||| ||||||||||| | Sbjct 2955 CTGTTGCGGACGCCGTGCTCCTTGATC--TTCAGACGGAGCGAGTCCCAGTCCCACAGGT 2898 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745 | || || || |||||| ||| ||| | |||||| | | ||| ||| | Sbjct 2897 CAGACGGCTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCT 2838 Query 138746 CGTACGAATCGTATACA---CCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCAC 138802 | |||| ||| ||| || | ||| | |||| ||| ||| ||| || Sbjct 2837 CATACG--TCGCATAGGTGCCCTCAATCTGG-GCCAGGTCGCACGACGCAGTGAGAGCGG 2781 Query 138803 CATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACG 138862 | | ||| || || || || |||| |||||| || ||||||| ||| | | Sbjct 2780 CGTGGTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAAAGG 2721 Query 138863 GCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGAT 138922 ||||||| ||| | ||| || || |||||||| ||||| |||| || | ||| || | Sbjct 2720 GCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGT 2661 Query 138923 GGCGCAGATTTGACGCTTTTG-CGGCTTCG---ATAGGATAATAGTTTACATCGATGATT 138978 |||||| || ||| || |||| || | || || ||||| ||||| ||||| Sbjct 2660 GGCGCATGTT----GCTGTTCTCGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATG 2605 Query 138979 TTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCT--TTAATCGT-TCAAAATCGTAT 139035 ||| | || || || | || || || | | || | | | | | || ||||| Sbjct 2604 CGGTTCAGGTTGCGGACAAGCAGCT--GT-GCAACCTCGTGGAGCTTCTTGAAGTCGTAC 2548 Query 139036 GTGCCCCCGTTGTCGTCGACGAC-GTCGACAAATTTGTTGACACAAATCGAGGCTATGTT 139094 || | ||||| ||| || | | || || || | | || |||| ||| Sbjct 2547 GTCTCGTTGTTGTAGTCAACAAAAGACGGCAG---TGCT-------AGGGAAGCTAGGTT 2498 Query 139095 GCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACA 139154 |||||| || || || || || | ||||| || ||||| || | ||||| || | Sbjct 2497 GCACACAGCAACCTCATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCT 2438 Query 139155 CTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCAT 139214 ||| || |||| || | || ||||| || |||||||| || ||||| ||||| Sbjct 2437 GCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCAT 2378 Query 139215 ATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCC--CTAG-- 139270 |||| |||| || ||| || | ||| | || | | || || | || | Sbjct 2377 GAACGGATTGCCCGTCTCCGTCTGAGCCTCGAGAAC---TGCGTACCAGAGCTTCTGGGC 2321 Query 139271 CTTG---TATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGA 139327 |||| | |||| || | | | |||||||||||||| || || || | || | Sbjct 2320 CTTGACCTTTTTGCGGCC----ACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAA 2265 Query 139328 A-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCAT 139386 | |||| | |||||| |||| | ||| || |||||| || || ||||| |||| ||| Sbjct 2264 ACTCGT-CGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCAC 2206 Query 139387 ACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAA 139446 |||||||| || || ||| ||||||||||||| || ||||| | || | | || | Sbjct 2205 TCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGA 2146 Query 139447 TCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTT---CATGTTAAGGAAATCAAAA 139503 ||||| || | || ||| ||||| | ||| || || |||||| ||||| Sbjct 2145 TCGCGAGCACGAATCTCCTCC-TTGCCATGGT--TTTTGCGCAGGTCAAGGAACTCAAAG 2089 Query 139504 ACGTCAGCGTGCCATGGTTCCAGATAGATG 139533 || ||||| ||||| || || || |||||| Sbjct 2088 ACATCAGCATGCCAAGGCTCTAGGTAGATG 2059 >seq2379 Length=13478 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || || || || || || | | Sbjct 4557 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGTCGTCG 4498 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 4497 GACACCATCGATAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAG 4438 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| |||||| | | | | || || || ||| Sbjct 4437 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGACGGACCCTTTCGGACTACAAC 4378 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| ||||| || ||| ||||| |||| | ||||| ||| Sbjct 4377 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGGCTCCGCGGTGGC 4330 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||||| || || || || || || || || || || | | Sbjct 4329 ATGCAGATTTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 4270 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| ||||| || || || || || || || Sbjct 4269 GACACGATTGACAATGTGAAGTCTAAAATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 4210 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || ||| |||||||| | | | || || || ||| Sbjct 4209 CAGCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACGCTATCGGACTACAAC 4150 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||||||||| || ||| ||||| |||| Sbjct 4149 ATCCAGAAGGAATCGACTCTTCACCTGGTGCTGCG 4115 >seq1920 Length=25525 Score = 98.7 bits (108), Expect = 9e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 16945 ATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTTGAGGTCGAGAGCAGC 16886 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 16885 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 16826 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| ||||| || ||||| || ||| | | | || ||||| ||| Sbjct 16825 CAGCGCTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGGACTCTCTCCGATTACAAC 16766 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAA 24935 || || ||||| || || ||| ||||| | || | || || |||| || Sbjct 16765 ATCCAGAAGGAGAGCACTCTCCACCTGGTGCTACGGCTCCGTGGTGGCGCAA 16714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449882489064360