Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2052 129 5e-25 >seq2052 Length=20734 Score = 129 bits (142), Expect = 5e-25 Identities = 213/306 (70%), Gaps = 1/306 (0%) Strand=Plus/Minus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 ||||||||| ||||||||| || || |||||| | ||| | | ||||||| ||| Sbjct 6266 ACAAACTTGGAGATGAAACCGTCGAGATAGTCCTGAAGCTTGGCTGCCTCGTGGGCACCG 6207 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || |||| |||| | || || || ||||||||| | || Sbjct 6206 TTGATGATCCAGCGGTCGTCGGGCGGGTCGATGTTTGTCTGGGCACCCAGCTCGAAACCA 6147 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 |||||||| || |||| | || || | |||| || ||||| | | |||| Sbjct 6146 AAGTACTTGATCAGGTAGGCTCCGGGGCGGGCGAGCGACTGGGCGACGCTGCTGAGGTTG 6087 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590 || || |||||||||||||||||||| ||||||| ||||| ||||||| ||| Sbjct 6086 GTGACAACCGTCTTGATGCCGTTGCCCTTGCCTTCGATCTTGGTCTGGATGCGCTCCATC 6027 Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCT 34650 |||||||||||||| |||||| |||| ||| |||||| | | ||| ||||| Sbjct 6026 TTGTAGCGGTAGAAGACGTCCGTGACATCACGGCGAACGTTGATGAGACTCATGGTGGC- 5968 Query 34651 GGTGTT 34656 |||||| Sbjct 5967 GGTGTT 5962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412828080340691