Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1920 138 7e-28
seq2379 131 1e-25
seq1979 107 1e-18
>seq1920
Length=25525
Score = 138 bits (152), Expect = 7e-28
Identities = 162/217 (75%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||||||||||||| ||||| || || || || | || ||||
Sbjct 16734 AGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGAGTCCGTCCATCT 16793
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||||| || |||||||| |||| | |||||||||||
Sbjct 16794 TCTAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 16853
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || || |||||| |||| ||| ||
Sbjct 16854 TGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCGCTGCTCTCGACCTCAAGGGTAAT 16909
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| ||||||||||| || || ||||||||||||
Sbjct 16910 TGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATG 16946
>seq2379
Length=13478
Score = 131 bits (144), Expect = 1e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821
|| ||| |||||||||| || |||||||| ||||| ||||||||||| |||| |
Sbjct 4114 CCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGATAGCGTGCGGCC 4173
Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881
||| |||| ||||| || |||||||| || || ||||||||| |||| | ||||||||
Sbjct 4174 ATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTT 4233
Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941
||| | ||||| || || | |||| || | ||| || || | ||| ||
Sbjct 4234 GTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCCACCTCCAGGGTGAT 4293
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| ||||| || |||||||| || |||||||||
Sbjct 4294 CGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCATG 4330
Score = 127 bits (140), Expect = 1e-24
Identities = 171/238 (72%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||| || || | |||| ||||||||| ||||| || || || || |||| | ||
Sbjct 4573 CAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGCGTGCGGCCGTC 4632
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||||||||| || ||||| || ||||| || | || | |||||||||||
Sbjct 4633 CTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTC 4692
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| | |||||| || | ||| |||||
Sbjct 4693 CTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGGGTGATGGT 4752
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGGACTAGTCGTGATTGTGA 35002
||| || ||||||||||| || || ||||||||||| | || | ||| || |||||
Sbjct 4753 CTTGCCTGTGAGGGTCTTGACGAAAATCTGCATGATGGCGGTTTTGTCTTGGATGTGA 4810
Score = 120 bits (132), Expect = 2e-22
Identities = 159/220 (72%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821
|| ||| |||||||| | || ||||||||||||||| |||||||| ||| | || |
Sbjct 4342 CCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGGGTCCGTCC 4401
Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881
||| || || ||||| || ||||| ||||| || |||||||| | || | ||||||||
Sbjct 4402 ATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGTGGGATACCCTCCTT 4461
Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGG 34937
||| | || || ||||| | ||||||| || | |||||| || | |
Sbjct 4462 GTCCTGGATCTTGGACTTGAC----GTTATCGATGGTGTCCGACGACTCGACCTCCAGAG 4517
Query 34938 TTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| |||||||| || || || ||||| || |||||||||||
Sbjct 4518 TGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 4557
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | || |||||||| || || |||||||| ||| |||| | ||
Sbjct 3890 AGCACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCGTCC 3949
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || || || || || ||||||||| | || | |||||||||||
Sbjct 3950 TCCAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 4009
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | ||| || || | ||| || |||
Sbjct 4010 TGAATCTTCGACTTCACGTTGTCAATCGTATCTGATGACTCAACCTCCAAGGTAATCGTC 4069
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || || ||||||||
Sbjct 4070 TTCCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101
>seq1979
Length=23555
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | || ||||||||| || || ||||| || ||| | || | ||
Sbjct 2790 AGCACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAGGGTACGGCCGTCC 2849
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || |||||||| || |||||||| |||| | |||||||||||
Sbjct 2850 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 2909
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| || || |||||| || | ||| ||||||
Sbjct 2910 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 2969
Query 34946 TTTCCCGTGAGGGTCTTTACAAAG 34969
|| ||||| |||||||| || |||
Sbjct 2970 TTGCCCGTAAGGGTCTTCACGAAG 2993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325682134273253
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |