Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2379 98.7 8e-16 >seq2379 Length=13478 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || | ||| || ||||| || || || ||||| ||||| | Sbjct 4559 CCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAG 4618 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| || ||||| || || || ||| | |||| | ||||||||||| || Sbjct 4619 AGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGG 4678 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || ||| || | ||||| | || | || |||||| || || Sbjct 4679 ATGCCCTCCTTGTCCTG-AATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGAC 4737 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | ||| || || || |||||||| Sbjct 4738 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCAT 4785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385206584913867