Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1920 113 3e-20
seq2379 100 2e-16
>seq1920
Length=25525
Score = 113 bits (124), Expect = 3e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594
|||| ||||| || ||||||||||| || || ||||||||||||||||| || ||| |
Sbjct 16731 CGTAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGAGTCCGTCCA 16790
Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654
|| || | || || ||||| || ||||| |||||||| || |||| | || || |||
Sbjct 16791 TCTTCTAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTG 16850
Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713
|| || || | | |||| ||| | |||||||| || || |||| || ||
Sbjct 16851 TCCTGGATCTT-GGACTTGACATTGTCGATAGTGTCGCTGCTCTCGACCTCAAGGGTAAT 16909
Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| ||||| || | ||||| || |||||||||||
Sbjct 16910 TGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCAT 16945
>seq2379
Length=13478
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| || | || ||| | || | ||| || ||| ||| || || ||||||||||||||
Sbjct 4558 ACCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 4617
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| |||| || | || |||||||||||||||| |||||||||||| | ||
Sbjct 4618 GAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGG 4677
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| ||| || | | || | ||| | ||| || || || |
Sbjct 4678 GATGCCCTCCTTGTCCTGAATCTT-GGACTTGACGTTGTCGATGGTATCAGAAGACTCGA 4736
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || ||||| | || || || || ||||||||
Sbjct 4737 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCAT 4785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328693235663040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |