Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2379 91.5 3e-13
seq1920 89.7 1e-12
>seq2379
Length=13478
Score = 91.5 bits (100), Expect = 3e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231
||||| ||| | ||| ||||| || || || |||||||| |||| ||||| || ||
Sbjct 4326 CAGAT-TTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCGGA 4268
Query 206232 CACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
||| | || || ||| || || || || || || || || ||| ||| ||
Sbjct 4267 CACGATTGACAATGTGAAGTCTAAAATCCAGGACAAGGAGGGCATCCCGCCAGACCAGCA 4208
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| ||||||||||| || ||||||||||| ||||| | || | | || |||||| |
Sbjct 4207 GCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACGCTATCGGACTACAACAT 4148
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||| || || ||||||||||| ||
Sbjct 4147 CCAGAAGGAATCGACTCTTCACCTGGT 4121
>seq1920
Length=25525
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || || || || || | || || || || ||||| ||||
Sbjct 16930 AAAACCCTCACGGGTAAGACAATTACCCTTGAGGTCGAGAGCAGCGACACTATCGACAAT 16871
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || ||| ||| || | | ||||||
Sbjct 16870 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTC 16811
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | ||||||||| ||||| | ||||||||||| ||||||| |||
Sbjct 16810 GCCGGCAAGCAGCTAGAAGATGGACGGACTCTCTCCGATTACAACATCCAGAAGGAGAGC 16751
Query 206365 ACTCTTCACCTTGT 206378
||||| ||||| ||
Sbjct 16750 ACTCTCCACCTGGT 16737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181780113233727
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |