Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2379 91.5 3e-13 seq1920 89.7 1e-12 >seq2379 Length=13478 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231 ||||| ||| | ||| ||||| || || || |||||||| |||| ||||| || || Sbjct 4326 CAGAT-TTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCGGA 4268 Query 206232 CACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||| || || || || || || || || ||| ||| || Sbjct 4267 CACGATTGACAATGTGAAGTCTAAAATCCAGGACAAGGAGGGCATCCCGCCAGACCAGCA 4208 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | ||||||||||| || ||||||||||| ||||| | || | | || |||||| | Sbjct 4207 GCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACGCTATCGGACTACAACAT 4148 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||| || || ||||||||||| || Sbjct 4147 CCAGAAGGAATCGACTCTTCACCTGGT 4121 >seq1920 Length=25525 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || || || | || || || || ||||| |||| Sbjct 16930 AAAACCCTCACGGGTAAGACAATTACCCTTGAGGTCGAGAGCAGCGACACTATCGACAAT 16871 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || ||| ||| || | | |||||| Sbjct 16870 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTC 16811 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | ||||||||| ||||| | ||||||||||| ||||||| ||| Sbjct 16810 GCCGGCAAGCAGCTAGAAGATGGACGGACTCTCTCCGATTACAACATCCAGAAGGAGAGC 16751 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 16750 ACTCTCCACCTGGT 16737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181780113233727