Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq556 201 2e-45
seq2400 150 3e-30
seq2494 136 6e-26
seq2134 118 2e-20
seq80 104 3e-16
seq622 95.1 2e-13
>seq556
Length=72248
Score = 201 bits (222), Expect = 2e-45
Identities = 352/498 (71%), Gaps = 26/498 (5%)
Strand=Plus/Minus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317
||||||||| || | || | |||||| ||| | ||| ||||||||||||||| ||
Sbjct 36614 CTCCATCTCGCCGAAACGCAGGCCGCCATCGCGGGCGCGACCCTCGACCGGCTGCCGCGT 36555
Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377
| ||||| ||||| ||||| | |||||||| ||||||||| | ||| |||||||||
Sbjct 36554 CATGATCTGCACGGGTCCGCGGGCGCGGGCGTGGATCTTGTCGTCGACCATGTGGCGCAG 36495
Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGC---CGGTGT 1600433
||||||||| || |||| | |||| | || || ||| || ||||||
Sbjct 36494 CCGCTGGTAGTACGTGGG-GCCGAAGAAGACCTGGGCGCGCA---GCTTGCGGCCGGTGT 36439
Query 1600434 GCGGGTGGTAGAGCACCTCCTTGCCGTAGCG-CTCGCATCCGTGG-CGAGCCAACTCGGC 1600491
| |||||| | | ||| |||| ||| || | | ||||| || || | | | |
Sbjct 36438 GGCCGTGGTACATGATCTCGAAGCCGC-GCGACTGGTAGCCGTGCTCGCGC-AGCAGGCC 36381
Query 1600492 GGCGACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGCG 1600551
| |||| ||||||||||||| || ||||||||| |||||||| | ||||| | |
Sbjct 36380 TGAGACAGAGTCGACGGTGACGTCGGTAAAGGGCGTAGCGTCGCCCTCCATGCCCTTGAG 36321
Query 1600552 GCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGAT 1600611
||||||||||| ||| || ||| |||| | | || |||||||||||||||||
Sbjct 36320 CGTGGCCACCTTGCTCAGCAGACACTCGATCAGATGCGCAATCGTCATGCGCGACGGGAT 36261
Query 1600612 GGCGTGCGGGTTGATCACAATGTCGGG--CGTGGCACCGCCGCGAGGCGACCAGGGCATG 1600669
||||||||||||||| | |||||||| || || || || | || | ||||||
Sbjct 36260 GGCGTGCGGGTTGATGATGATGTCGGGAACGATGC----CCTCG-GTCGTAAACGGCATG 36206
Query 1600670 TCCTCGG---TGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGT 1600726
|| |||| | || ||| ||| | |||||||||||| ||||||||||||| |
Sbjct 36205 TCTTCGGAGCGGTAGGTCAC---GCCAATGGTGCCCTTTTGTCCGTGGCGCGACGCAAAC 36149
Query 1600727 TTGTCGCCCACCT-CGGG 1600743
|||||||| | || ||||
Sbjct 36148 TTGTCGCCGATCTGCGGG 36131
Score = 149 bits (164), Expect = 9e-30
Identities = 243/345 (70%), Gaps = 9/345 (3%)
Strand=Plus/Minus
Query 1601134 GCGGAAGCCGCCGCGGTCGACAAAGTCCTGCTTGAGCACGAGCGAGTCCTCCTGGTTGTA 1601193
|||||| ||||||||||| | ||| || | | | ||||||||||||||||||
Sbjct 35768 GCGGAACAGGCCGCGGTCGATGCTGCTCTGGTTCATGATCACCGAGTCCTCCTGGTTGTA 35709
Query 1601194 G---GGGTCGCTCATGATGGCCACGCGCGCATTCTGGCCCATCGGGAGGCGCGTGGCGCC 1601250
| | || || || |||||||||| || ||||| ||| ||| || | || || |
Sbjct 35708 GCCCGAGTAGCACAGGATGGCCACGATGGCGTTCTGACCCGCCGGAAG-CTCGCGGAACT 35650
Query 1601251 GATGACGTCCTCCATGG--CG-GTCTGCACCAGCGGCACCTGCGGGTAGCACAGGGCGTG 1601307
||| || |||||| | || ||| | |||||||| |||||||||| |||| |||
Sbjct 35649 --TGAGGTACTCCATCGACCGCGTCGTCGCCAGCGGCTTCTGCGGGTAGTACAGCACGTT 35592
Query 1601308 CGACACCGTGTCGATGGCATGGTCGGCGTTGAGCGACACGACGGCCTTGCTCTGCTTGCC 1601367
| || |||||| ||| | | |||| | | || | || | |||||||||
Sbjct 35591 GGCCATCGTGTCCATGCGCCGCGGGTAGTTGGTCAGGAAGAAGCCCATCGCCTGCTTGCC 35532
Query 1601368 CATGGCCGTCTGGTAGATGTTGCGCGGCGCCTGGTTGTGGTTGGAAAACGGGATGATGGA 1601427
|||||||| |||||| |||| || |||| ||||||||||| | ||||||||||||
Sbjct 35531 CATGGCCGACTGGTACGTGTTACGGGGCGACTGGTTGTGGTCTGGGAACGGGATGATGCT 35472
Query 1601428 CGCGCAGGCGCCCAGCATGAGCAGCGGGTGGACCTCGACGTGCGT 1601472
||||||| |||||||| | |||||||| |||| ||||||
Sbjct 35471 CGCGCAGATGCCCAGCAGCATGCTCGGGTGGATCTCGCAGTGCGT 35427
>seq2400
Length=47555
Score = 150 bits (166), Expect = 3e-30
Identities = 214/296 (72%), Gaps = 5/296 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||| |||||| || || ||||| || |||||| ||||||
Sbjct 7033 GATCTGGCAAATGTAC-AAGAAGCACGAGGCTTCGTTCTGGACTGCTGAGGAGATCGACC 7091
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | || | | ||||| ||| ||| ||| || |||||| ||| ||
Sbjct 7092 TCTCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGATGAGCGCTTCTTCGTCT 7151
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||| |||| || || ||| |||||| ||| |||||||| ||||||||| | |
Sbjct 7152 CGCACATCCTGGCGTTCTTT-GCCGCCTCCGACGGCATCGTCAACGAGAACCTAGTTGAG 7210
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | |||||||| |||| ||||| || | |||||||| |||||||||
Sbjct 7211 CGCTTCAGTGCTGAGGTCCAGGTGCCGGAGGCTCGCTGCTTTTACGGCTTCCAGATCATG 7270
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||| ||||||| || || ||||| || || |||||||||||| |||||||
Sbjct 7271 ATGGAGAACGTCCACTCCGAGACATACTCCCTGCTCATCGACACCTACATCAAGGA 7326
Score = 118 bits (130), Expect = 2e-20
Identities = 183/256 (71%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577
|| |||| |||||||| || ||| |||| ||| | ||||| ||| |||| | || ||
Sbjct 7697 AGGAGATAATCGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTCACCGAGGCCCTTCCCT 7756
Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637
|| || ||||||||||| ||| | |||||| |||||||||| | || || |||||
Sbjct 7757 GCGCTCTGCTCGGCATGAACTCCA-CACTCATGAAGCAGTACATTG-AGTTCGTTGCCGA 7814
Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697
|||||| || | || |||||| || ||| ||||| | ||||||| ||| |
Sbjct 7815 CCGCCTTCTGGTTGCCCTCGGC-AATGATAAGGTGTACCGTTCCACCAACCCCTTCGACT 7873
Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756
|||||| ||||| || | |||||||||||||| |||||| || || || || |
Sbjct 7874 TCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACT 7933
Query 1456757 ACGCCAAGGCCGGCGT 1456772
|| |||||||| ||
Sbjct 7934 ACCAGAAGGCCGGTGT 7949
Score = 87.8 bits (96), Expect = 3e-11
Identities = 114/154 (74%), Gaps = 3/154 (2%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
|| |||||||| ||||| | ||||||||| || | | || || |||||| |||
Sbjct 7441 AAGAAGGCCGATTGGGCTCTCAAGTGGATCT-CAGACCGCGAGTCCAC-CTTTGCTCAGC 7498
Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241
| || |||| |||||||| || ||||||||||| ||| || |||| ||||||
Sbjct 7499 GCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTTCTCTTCCATCT 7558
Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
| ||||| |||||||||||||| ||||| || ||
Sbjct 7559 TCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCT 7592
>seq2494
Length=11727
Score = 136 bits (150), Expect = 6e-26
Identities = 335/507 (66%), Gaps = 21/507 (4%)
Strand=Plus/Plus
Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741
|||| |||| | | ||| | ||||| | ||| ||| ||||| |||| || |||
Sbjct 1544 CACAGAGAGGACTTTGACTCGGCCATTGTCTACGACCGCGACTTCAACTACCAATATTTT 1603
Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGAT---ATTGTCGTCGAG 259798
||| | ||| || ||||| ||||| ||| || |||| | | ||||||
Sbjct 1604 GGTTTCAAGACACTGGAGCGGTCTTACCTACTCAA---GCTCGATGGCAAGATTGTCGAG 1660
Query 259799 CGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGAC 259858
||||| ||| | ||| | ||||| || || ||||| | |||| | ||
Sbjct 1661 CGGCCGCAGCACATGATTATGCGCGTGGCAGTTGGCA--TCTGGGGT----------GAT 1708
Query 259859 AATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCA 259918
|||| |||||| ||| | | || ||| | ||||||| | | || |||||
Sbjct 1709 AATG---TGGAGCGTGTGGTTGAGACATACAACTACATGTCGAACAAATTCTTCACGCAT 1765
Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978
|| |||| || ||||| || |||||||| || | | || | || || ||||| ||
Sbjct 1766 GCCTCGCCGACACTCTTCAACGCCGGCACACCACAGGCCCAAATGTCATCCTGCTTCCTT 1825
Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038
||||||| |||| || || ||||| ||||||||||| |||||| || || |
Sbjct 1826 GTGGACATAAAGGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATG 1885
Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098
||||||||| |||| || ||||| || | || ||| | || || | ||| ||
Sbjct 1886 ATCTCCAAGACGGCTGGTGGCATTGGCCTCAACGTCCACCGTATCCGGGCTACCGGCTCC 1945
Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158
||| | || ||||| |||||| |||||| ||| | | || ||||| || || | |||
Sbjct 1946 TACATTGCCGGCACAAACGGCACGTCCAATGGCATCATCCCTATGCTCCGTGTCTACAAC 2005
Query 260159 GACACGGCGCGCTACGTCGACCAGTGC 260185
||||||| ||||| || |||||| ||
Sbjct 2006 AACACGGCTCGCTATGTGGACCAGGGC 2032
Score = 129 bits (142), Expect = 8e-24
Identities = 336/509 (66%), Gaps = 24/509 (5%)
Strand=Plus/Plus
Query 262913 AGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGA 262972
|||| ||| | |||||| || | ||||| | |||||| || || ||||||||||||
Sbjct 2937 AGCACGGCGTCCGCAACAGTCTGTTGGTGGCCCCCATGCCAACAGCGTCGACGTCGCAGA 2996
Query 262973 TCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGC 263032
|||||||||||| ||| |||||| |||| |||||||||| ||||||| ||||
Sbjct 2997 TCCTGGGCAACAACGAATGCTTCGAGCCGTACACGTCCAACATCTACTCGCGCCGTGTGC 3056
Query 263033 TCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCC 263092
| ||||||| ||| || ||||||| ||| | ||| | || | || |
Sbjct 3057 TGGCGGGCGAGTTTCAGGTTGTCAACCCGTGGCTGCTGAAGGATCTCGTTGATATGGGGC 3116
Query 263093 TGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGC---TCGGTGCAGGGCT 263149
||||| || | || | |||| ||||||| | ||||| ||| | ||| |
Sbjct 3117 TGTGGTCGGACAACATGAAGAACCGCATCATTGCCG---AGGGCGGTTCGATCCAGAACA 3173
Query 263150 TTGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGC 263209
| | || | ||| |||| |||||||||| | ||||||||| |||||| |
Sbjct 3174 TCCCCAAC------ATCCCGGCCGACATCAAGGCTCTGTACAAGACCGTTTGGGAGATCT 3227
Query 263210 CCAACCGGGTGACCATTG---ATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCC 263266
| | || || |||| | |||||||||||||| | | | |||||||| |
Sbjct 3228 CGCAGCG---CACGATTGTGCAGATGGCGGCCGACCGTGGCGCGTTCATCGACCAGTCGC 3284
Query 263267 AGTCGCTCAACCTGTACCTCGCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACG 263323
||||||||||| | || | || || || || | || ||||| ||||||
Sbjct 3285 AGTCGCTCAACATTCACATGCGTGAGCCCACCATGGGCAAG---ATCACAAGCATGCACT 3341
Query 263324 CCTATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTG 263383
| | ||| | ||||| ||||| || |||||||| |||||||| | | | || |
Sbjct 3342 TCACCGGCTGGAAGCTGGGCCTGAAGACGGGAATGTACTACCTGCGCACGCAGGCAGCCG 3401
Query 263384 CCAACGCCATTCAATTCACCGTCGATCAG 263412
|| | |||| || ||||| ||||| |||
Sbjct 3402 CCCAGCCCATCCAGTTCACGGTCGACCAG 3430
>seq2134
Length=52788
Score = 118 bits (130), Expect = 2e-20
Identities = 202/293 (69%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911
|| ||||| || || || | | |||||||| || || || |||||| | |||||||
Sbjct 25243 TGCGCGTCCGTCAGCCGGGCGTACCGCAGGATCGCGCACCGCGACTGCAGCGGCTCGATG 25302
Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971
| | | ||| |||||| || | || ||||||||||| || | | | |||||
Sbjct 25303 ATCTTGTTGGACTGGTTGCACGCAAACGCGAACCGCGTCGTGTTCGAGTAGATCTCCATC 25362
Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031
||| ||| || ||||| || || ||| ||| | | ||| |||||||| |||||||
Sbjct 25363 GTCCGCCGCAGCGCCTGCTGCGCTCCCGACGTCATACTGTCCGCCTCGTCCAGGATGACA 25422
Query 333032 ATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTG 333091
|||||||| || || |||||| ||| | ||| || | |||||| |||
Sbjct 25423 ATCTTGTGCCGTCCCGCCGGCAGCGTCACCTTCTTCTGCGCAAAGCCCTTGATGCGGTTG 25482
Query 333092 CGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTC 333144
||||| ||||| | ||| |||||||| |||||| || || | ||| |||||
Sbjct 25483 CGCACCACGTCGATGCCTCGCTCGTCGCTCGCGTTCAGCTCCAACACCGCCTC 25535
>seq80
Length=41925
Score = 104 bits (114), Expect = 3e-16
Identities = 117/152 (77%), Gaps = 6/152 (4%)
Strand=Plus/Minus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
|| |||||||| || |||||||||||||||||| ||||||||||| |||| || | |||
Sbjct 36125 GGTGCCGTCGGCGCCCGCACCACCGAGAGCCAGCTGCACCGCGAGCTGGCCTCCGGCCTG 36066
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA-GCGTGGCGACGGCCCTCGATGC 165886
| | || | |||||||||||| |||| ||||||| || |||| | ||| |||| ||
Sbjct 36065 TCCTTCCCTGTCGGCTTCAAAAACGGCACTGACGGCACGCTCGGCGTC-GCCATCGACGC 36007
Query 165887 CGTGCGCACTGCCGCCCAGC-CACACACCTTT 165917
| | || ||||| | ||| | |||||| ||
Sbjct 36006 CATCCG---TGCCGTCAAGCACCCACACCATT 35978
>seq622
Length=4137
Score = 95.1 bits (104), Expect = 2e-13
Identities = 95/121 (79%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
|||||| |||| || |||||||||||||||||| ||||||||||| | || || | ||
Sbjct 3233 GGCGCCATCGGCGCCCGCACCACCGAGAGCCAGCTGCACCGCGAGCTCGCTTCCGGCCTA 3174
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGT-GGCGACGGCCCTCGATGC 165886
| | ||| | |||||||| ||| |||||||||||| | | |||| | ||| |||| ||
Sbjct 3173 TCCTTCCCCGTCGGCTTCAAGAACGGCACCGACGGCAACCTGGGCGTC-GCCATCGACGC 3115
Query 165887 C 165887
|
Sbjct 3114 C 3114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177552033911294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |