Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1920 125 6e-24 seq2379 109 5e-19 seq1979 100 3e-16 >seq1920 Length=25525 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || | ||||| || | || |||||||| || ||||||||||||| Sbjct 16719 CCACCACGGAGCCGTAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAG 16778 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| ||||||||||| | || Sbjct 16779 AGAGTCCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGG 16838 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||| | | | | | |||||||| || ||| Sbjct 16839 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTGCTCTCGACC 16898 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || |||||||| | |||||||| || |||||||| Sbjct 16899 TCAAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCAT 16945 >seq2379 Length=13478 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || ||||| || | | ||| || |||| ||||||||||| |||||||| Sbjct 3911 TCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAA 3970 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | |||||||||||| | |||| || |||||||||| ||||| ||||| ||| Sbjct 3971 ATGAGCCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCA-CGTT 4029 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||| || || || ||||||| || ||||| || || |||| || || || Sbjct 4030 GTCAATCGTATCTGATGACTCAACCTCCAAGGTAATCGTCTTCCCTGTCAGCGTCTTGAC 4089 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 4090 GAAAATCTGCAT 4101 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || || ||||| || | || ||||| || |||||||| || | Sbjct 4103 CCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGAT 4162 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||| |||||| || || || || | ||||||||||| | || Sbjct 4163 AGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGCGGG 4222 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||| || ||||| | | | | |||||| ||| |||||| Sbjct 4223 ATGCCCTCCTTGTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCCACC 4282 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||||||| || ||||| | || || || || |||||||| Sbjct 4283 TCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCAT 4329 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | || || ||||| || | ||| |||||| ||||||||||| || | Sbjct 4331 CCACCGCGGAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAA 4390 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || |||| ||||||||||| | || Sbjct 4391 AGGGTCCGTCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGTGGG 4450 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | ||||| ||| || ||| Sbjct 4451 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATGGTGTCCGACGACTCGACC 4510 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || |||| || || || || |||||||| Sbjct 4511 TCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 4557 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | || || |||| || |||||||| || ||||| Sbjct 4594 CTCCTTCTGGATGTTGTAATCGGAGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAA 4653 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| |||| || | || |||||||||| ||||| ||| | || Sbjct 4654 AATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 4712 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | ||||| || || || || | || || | Sbjct 4713 TGTCGATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGA 4772 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 4773 CGAAAATCTGCAT 4785 >seq1979 Length=23555 Score = 100 bits (110), Expect = 3e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || | || ||| || |||| || |||||||| || ||||| Sbjct 2810 CTCCTTCTGGATATTGTAGTCAGACAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAA 2869 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | || |||||||||| |||||| ||| | | | Sbjct 2870 GATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 2929 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| ||||| || || ||||| | || ||||| Sbjct 2930 GTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCAC 2989 Query 35725 AAA 35727 || Sbjct 2990 GAA 2992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450778458969960