Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 230 3e-55
>seq2494
Length=11727
Score = 230 bits (254), Expect = 3e-55
Identities = 1057/1657 (64%), Gaps = 61/1657 (4%)
Strand=Plus/Minus
Query 110525 ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG 110584
|| |||||||| || || ||| |||||| || | ||||| | | ||| ||||||
Sbjct 3225 ATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCCGGGATGTTGGGGATGTTCTGG 3166
Query 110585 ATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644
|| ||||| ||| | | ||| | | |||||| | | ||||| || || || |
Sbjct 3165 ATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGCCCCATATCA 3106
Query 110645 TTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTC 110704
||| || || | || | |||||||| |||||| || || || | | |
Sbjct 3105 ACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAACTCGCCCGCCAGCACACGGCGC 3046
Query 110705 AGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 110764
||||||||| | ||||| || || |||||||| || || |||| ||| || | ||
Sbjct 3045 GAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGACGTC 2986
Query 110765 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824
|| ||||||||||| || |||| ||| |||||||| || | || | ||||||||| |
Sbjct 2985 GACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGGACGCCGTGCTCCTTGATC--T 2928
Query 110825 TCCTTGAGAACA--TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880
|| || | |||||||| | | | || || ||||| | ||||||||||
Sbjct 2927 TCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC-GGCTTCACGT-CCCACATGTCGGG 2870
Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940
||| || | || || ||| | ||||| |||||| | || |||||| || | |
Sbjct 2869 CTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGTCGCATAGGTGCCCTCAATCTG 2810
Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000
|||| || || ||| || | ||||| || ||||| |||||||| | ||
Sbjct 2809 GGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGTT 2750
Query 111001 CATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCC 111055
| |||| || || || ||||| |||| |||| || ||| ||||
Sbjct 2749 GAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCGCAGCGCCAGGAAAG-----CATCT 2695
Query 111056 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC 111115
|| || || || ||||||||||||||||| | ||| ||||| || | ||| || | |
Sbjct 2694 GCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTT-GCTGTTCTCG--GCC 2638
Query 111116 TCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTT 111172
|| ||||| || | || ||||||| ||||| || || | || | || |
Sbjct 2637 TCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTTGCGGACAAGCAGCTGT 2578
Query 111173 GTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATAC 111226
| | || || || || | | || || || |||| | ||| ||| |
Sbjct 2577 GCAACCTCGTGGAGCTTCTTGAAGTC----GTACG--TCTCGTTGTTGTAGTCAACAAAA 2524
Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286
|| || || | || || | ||||| ||||| ||||||| | |||||||
Sbjct 2523 GACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTCATCCGGTGCACTGTACTCC 2464
Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346
| ||| || || || |||||||| || || || || | ||||| ||||| |||||
Sbjct 2463 ACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTG 2404
Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406
||| || ||||||||||||||| | || | |||||||||||||| | | ||||
Sbjct 2403 CGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGTCTGAGCCTCGAGA 2344
Query 111407 ATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTA 111465
| || | ||| | | || | | || | || | | | | || || || ||||||
Sbjct 2343 ACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGCGGCCACGACCTTCGCGCTCGTA 2285
Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525
||| || ||||| |||||||| || || |||| | ||||| || || ||
Sbjct 2284 CTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTT 2225
Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585
|| || | || | ||| | || | |||||||||||||||||| || || || ||
Sbjct 2224 GGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGAT 2165
Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
||| || | || ||||| | | ||| ||| || | || ||||| || |
Sbjct 2164 CCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCTTGCCATGGTTTTTGCGCAG 2105
Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC-GATAGATCCC- 111703
||||||||||| | || ||| || ||||| ||||| || |||| ||| || || |||
Sbjct 2104 GTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGTAGA-TGCAGAAAGCGCCCG 2046
Query 111704 --------TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755
|||| ||||| || | |||||||| || ||| ||| | || || |
Sbjct 2045 GGCGCTTGTTTC--CGCCC----TGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGGA 1992
Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 111815
|||| || || || |||| || || ||||| || ||| || | || |
Sbjct 1991 GCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCCC 1932
Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875
| | |||| || | ||||| || |||||| ||| ||||| ||||| |
Sbjct 1931 GGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTCT 1872
Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935
| || || |||||||||| | || ||| ||||| || | | ||||||||| |
Sbjct 1871 TGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGATG 1812
Query 111936 ACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA 111994
|||| || || || |||||| || || |||||||| || || | || || |||| |
Sbjct 1811 ACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAAT 1753
Query 111995 CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 112054
| ||||| | || ||||||||| | ||| || | | || || ||||||
Sbjct 1752 TTGTTCGACATGTAGTTGTATGTCTCAACCACACGCTCCACATTATCACCCCAGATGCCA 1693
Query 112055 ATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA 112114
| ||| || ||||| | ||||| ||| || || | | ||||||||||| ||||
Sbjct 1692 ACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCTTGCCATCGAGC--TTGA 1635
Query 112115 --AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
|| || | ||| || || |||| |||||| ||
Sbjct 1634 GTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATA 1598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628010905975200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |