Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2494 230 3e-55 >seq2494 Length=11727 Score = 230 bits (254), Expect = 3e-55 Identities = 1057/1657 (64%), Gaps = 61/1657 (4%) Strand=Plus/Minus Query 110525 ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG 110584 || |||||||| || || ||| |||||| || | ||||| | | ||| |||||| Sbjct 3225 ATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCCGGGATGTTGGGGATGTTCTGG 3166 Query 110585 ATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644 || ||||| ||| | | ||| | | |||||| | | ||||| || || || | Sbjct 3165 ATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGCCCCATATCA 3106 Query 110645 TTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTC 110704 ||| || || | || | |||||||| |||||| || || || | | | Sbjct 3105 ACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAACTCGCCCGCCAGCACACGGCGC 3046 Query 110705 AGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 110764 ||||||||| | ||||| || || |||||||| || || |||| ||| || | || Sbjct 3045 GAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGACGTC 2986 Query 110765 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824 || ||||||||||| || |||| ||| |||||||| || | || | ||||||||| | Sbjct 2985 GACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGGACGCCGTGCTCCTTGATC--T 2928 Query 110825 TCCTTGAGAACA--TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880 || || | |||||||| | | | || || ||||| | |||||||||| Sbjct 2927 TCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC-GGCTTCACGT-CCCACATGTCGGG 2870 Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940 ||| || | || || ||| | ||||| |||||| | || |||||| || | | Sbjct 2869 CTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGTCGCATAGGTGCCCTCAATCTG 2810 Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 |||| || || ||| || | ||||| || ||||| |||||||| | || Sbjct 2809 GGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGTT 2750 Query 111001 CATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCC 111055 | |||| || || || ||||| |||| |||| || ||| |||| Sbjct 2749 GAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCGCAGCGCCAGGAAAG-----CATCT 2695 Query 111056 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC 111115 || || || || ||||||||||||||||| | ||| ||||| || | ||| || | | Sbjct 2694 GCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTT-GCTGTTCTCG--GCC 2638 Query 111116 TCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTT 111172 || ||||| || | || ||||||| ||||| || || | || | || | Sbjct 2637 TCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTTGCGGACAAGCAGCTGT 2578 Query 111173 GTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATAC 111226 | | || || || || | | || || || |||| | ||| ||| | Sbjct 2577 GCAACCTCGTGGAGCTTCTTGAAGTC----GTACG--TCTCGTTGTTGTAGTCAACAAAA 2524 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 || || || | || || | ||||| ||||| ||||||| | ||||||| Sbjct 2523 GACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTCATCCGGTGCACTGTACTCC 2464 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | ||| || || || |||||||| || || || || | ||||| ||||| ||||| Sbjct 2463 ACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTG 2404 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 ||| || ||||||||||||||| | || | |||||||||||||| | | |||| Sbjct 2403 CGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGTCTGAGCCTCGAGA 2344 Query 111407 ATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTA 111465 | || | ||| | | || | | || | || | | | | || || || |||||| Sbjct 2343 ACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGCGGCCACGACCTTCGCGCTCGTA 2285 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| || ||||| |||||||| || || |||| | ||||| || || || Sbjct 2284 CTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTT 2225 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || || | || | ||| | || | |||||||||||||||||| || || || || Sbjct 2224 GGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGAT 2165 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | || ||||| | | ||| ||| || | || ||||| || | Sbjct 2164 CCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCTTGCCATGGTTTTTGCGCAG 2105 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC-GATAGATCCC- 111703 ||||||||||| | || ||| || ||||| ||||| || |||| ||| || || ||| Sbjct 2104 GTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGTAGA-TGCAGAAAGCGCCCG 2046 Query 111704 --------TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755 |||| ||||| || | |||||||| || ||| ||| | || || | Sbjct 2045 GGCGCTTGTTTC--CGCCC----TGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGGA 1992 Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 111815 |||| || || || |||| || || ||||| || ||| || | || | Sbjct 1991 GCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCCC 1932 Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875 | | |||| || | ||||| || |||||| ||| ||||| ||||| | Sbjct 1931 GGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTCT 1872 Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935 | || || |||||||||| | || ||| ||||| || | | ||||||||| | Sbjct 1871 TGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGATG 1812 Query 111936 ACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA 111994 |||| || || || |||||| || || |||||||| || || | || || |||| | Sbjct 1811 ACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAAT 1753 Query 111995 CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 112054 | ||||| | || ||||||||| | ||| || | | || || |||||| Sbjct 1752 TTGTTCGACATGTAGTTGTATGTCTCAACCACACGCTCCACATTATCACCCCAGATGCCA 1693 Query 112055 ATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA 112114 | ||| || ||||| | ||||| ||| || || | | ||||||||||| |||| Sbjct 1692 ACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCTTGCCATCGAGC--TTGA 1635 Query 112115 --AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 || || | ||| || || |||| |||||| || Sbjct 1634 GTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATA 1598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628010905975200