Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 232 8e-56
seq2400 109 7e-19
seq1891 82.4 9e-11
>seq2494
Length=11727
Score = 232 bits (256), Expect = 8e-56
Identities = 1181/1852 (64%), Gaps = 63/1852 (3%)
Strand=Plus/Minus
Query 117805 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 117861
||||||| ||||| || || || |||| | || ||||||||||| |||||||| |
Sbjct 3419 TGAACTGGATGGG-CTGGGCGGCT--GCCTGCGTGCGCAGGTAGTACATTCCCGTCTTCA 3363
Query 117862 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-C 117920
| ||| |||||||| | | ||||| | | |||| | ||| || || | |
Sbjct 3362 GGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCATGGTGGG-CTCACGC 3304
Query 117921 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTCCCCGATCCGCCGCCATATC 117979
||| | ||| | || || || |||||||| ||| || || || |||||||| |
Sbjct 3303 ATGTGAATGTTGAGCGACTGCGACTGGTCGATGAACGCG-CCACGGTCGGCCGCCATCTG 3245
Query 117980 AATCACATCCTTCAT--CTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCT 118037
| || ||| | | | ||| ||||| || ||| |||| || ||| || || |
Sbjct 3244 CA-CA-ATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCC 3187
Query 118038 GGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCC 118097
||||| | ||| || ||||| || || ||| | | ||| | | |||||| |
Sbjct 3186 GGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTG 3127
Query 118098 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 118157
| ||||| || || || | |||||||| || || | |||||||| ||||
Sbjct 3126 TCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAAC 3067
Query 118158 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 118217
|| ||||| || || | | ||||| |||| |||||| ||||| ||||| || |||
Sbjct 3066 TCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTG 3007
Query 118218 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277
|| |||| ||| || | || || ||||| |||||||| |||| | || ||||| |||
Sbjct 3006 TTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGG 2947
Query 118278 AGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG--TCCCAGTCGTA--GTTGAGCTTTGT 118333
| || | ||| | || ||| ||||| |||||||| | | | || |
Sbjct 2946 ACGCCGTGCTCCTTGATC--TTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC--GG 2891
Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393
|| | | | |||||| || ||| || || || || ||| | || || |||||| | ||
Sbjct 2890 CTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGT 2831
Query 118394 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453
| |||| | |||||||| || |||| ||| | ||| ||| || ||||| || ||
Sbjct 2830 CGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGAT 2771
Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 118513
|| ||||| || | || | || |||||| || ||||| | | ||
Sbjct 2770 GGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCGCAG 2711
Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573
| | || |||| || || || || ||||| | ||||| || || || | ||| ||
Sbjct 2710 CGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTT 2651
Query 118574 AGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630
||| ||| |||| ||||| || | || ||| || | | || || ||
Sbjct 2650 GCTGTTCT---CGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTT 2594
Query 118631 TTTGGTGACAACCTT-TGTG--ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 118687
| ||||| | |||| | || || ||||| | | | || | |||||
Sbjct 2593 ---GCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTAC------GTCTC 2543
Query 118688 TTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 118741
| ||| ||| | || || || | || || || || ||||||| |||
Sbjct 2542 GTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTC 2483
Query 118742 ATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAA 118801
|||| || ||||||| | ||| |||||||||||||| || || |||||||| |
Sbjct 2482 ATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAG 2423
Query 118802 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 118861
|||||| || || ||| |||||| |||||||| |||||| | || | |||||
Sbjct 2422 GTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGT 2363
Query 118862 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG 118920
|||||| || | || ||||| || | ||||| | || | || | || | | |
Sbjct 2362 CTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGCGGC 2304
Query 118921 CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 118980
| || || || ||||||||| || ||||| |||||||| || || | | || |
Sbjct 2303 CACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCG 2244
Query 118981 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCT 119040
|| || || || | ||||| | || | ||| | || || |||||||||||
Sbjct 2243 CCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCT 2184
Query 119041 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 119100
||||||| || || ||||||||||||||| ||| ||||| ||| ||| || || |
Sbjct 2183 TCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCT 2124
Query 119101 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 119160
|| || || |||| || | || || | || ||| || ||||| || || ||||
Sbjct 2123 TGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGT 2064
Query 119161 ACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGT 119217
| | || | ||| || || |||||| ||||| | || ||| ||
Sbjct 2063 AGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGTGTTGT 2004
Query 119218 TAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACG 119275
| | ||||| ||||| || ||||| |||| ||| ||| ||||| || || || |
Sbjct 2003 TGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGG 1944
Query 119276 AGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 119335
|| | | || | || | ||||| || | ||||| || || ||| ||| |||||
Sbjct 1943 AGCC--GGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGAT 1886
Query 119336 TTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 119395
|| || | |||| || | ||||| || || || |||| |||| | | |
Sbjct 1885 CATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCAC 1826
Query 119396 GAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCG 119454
||||||||| |||||||| |||||| ||||| || ||||||||||| || || | |
Sbjct 1825 AAGGAAGCAGGATGACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGAGG 1767
Query 119455 CGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTC--CAAGACG-GCGGGAATGT 119511
| || |||| | | ||||| | || ||| ||||| | | ||| | | | |
Sbjct 1766 CATGCGTGAAGAATTTGTTCGACATGTAGTTGTATGTCTCAACCACACGCTCCACATTAT 1707
Query 119512 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGA 119571
| ||| | || || | | || ||||||| ||||| || || || | |
Sbjct 1706 CACCCCAG---ATGCCAACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCT 1650
Query 119572 TACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
| ||||||||| | | |||||| | ||||| ||||||| |||||||||
Sbjct 1649 TGCCATCGAGCTTGAGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATA 1598
>seq2400
Length=47555
Score = 109 bits (120), Expect = 7e-19
Identities = 301/459 (66%), Gaps = 22/459 (5%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| || ||| | ||| ||||||||
Sbjct 7934 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 7875
Query 129788 AAATCAAATGGGTTCTTTGA--GTTCCAA------ATTGCTGGCACTCCAATCTGTTTGA 129839
|| || || ||||| | || | | || ||||| | | ||| | |
Sbjct 7874 AAGTCGAAGGGGTTGGTGGAACGGTACACCTTATCATTGCCG--AGGGCAACC------A 7823
Query 129840 GGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGA 129899
| || || || | ||| |||||||||||| ||| ||||||||| |||| |
Sbjct 7822 GAAGGCGGTCGGCAACGAACTCAATGTACTGCTTCATGAGTGTGGAGTTCATGCCGAGCA 7763
Query 129900 GGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGA 129959
| || || || || || || |||| ||| |||||| | ||||| || | |
Sbjct 7762 GAGCGCAGGGAAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACAGCATCGACGATTA 7703
Query 129960 TGGCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---G 130016
| | || || ||||| ||| || | || || | ||| || || | |
Sbjct 7702 TCTCCTGGATCATCTCCTTGCTGGGGCGGTTCTTCAGATGAGAGAACAG---CAGGCAAG 7646
Query 130017 CAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 130076
| || || ||| || ||||||||||| || || || || || |||||| ||| || |
Sbjct 7645 CGAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAG 7586
Query 130077 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 130136
|||| || || |||||||||| |||||| || | | | || | || ||||||||| |
Sbjct 7585 GCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGC 7526
Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
|||||||| || || || | || |||| ||||||||
Sbjct 7525 CCTCCACAGCGGCAAAAGCGACCAGGCGCTGAGCAAAGG 7487
>seq1891
Length=26656
Score = 82.4 bits (90), Expect = 9e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 180882 CTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGTCATCGTAGTTTGT 180941
||| || |||||||| || | ||||||||| | ||||||| ||||||||||||||| |
Sbjct 18899 CTTTGCGCCGTAGCCGTTTCTGCCACCAACAGTCCTCTTCTCGTTGTCATCGTAGTTGGA 18958
Query 180942 ACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCTCCTTTTCGTGCAT 181001
| ||||| |||||||| || ||||| ||| | | | | ||| || | ||||||
Sbjct 18959 GCCAGTGAGAAGGTGACCGAACAGCAGTTCGGGAATGTACACCTTCTCTTTCTGGTGCAT 19018
Query 181002 ACGAACACCGACACC 181016
|||| ||| |||
Sbjct 19019 CTCAACAACGATACC 19033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618414428307720
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