Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2494 232 8e-56 seq2400 109 7e-19 seq1891 82.4 9e-11 >seq2494 Length=11727 Score = 232 bits (256), Expect = 8e-56 Identities = 1181/1852 (64%), Gaps = 63/1852 (3%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 117861 ||||||| ||||| || || || |||| | || ||||||||||| |||||||| | Sbjct 3419 TGAACTGGATGGG-CTGGGCGGCT--GCCTGCGTGCGCAGGTAGTACATTCCCGTCTTCA 3363 Query 117862 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-C 117920 | ||| |||||||| | | ||||| | | |||| | ||| || || | | Sbjct 3362 GGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCATGGTGGG-CTCACGC 3304 Query 117921 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTCCCCGATCCGCCGCCATATC 117979 ||| | ||| | || || || |||||||| ||| || || || |||||||| | Sbjct 3303 ATGTGAATGTTGAGCGACTGCGACTGGTCGATGAACGCG-CCACGGTCGGCCGCCATCTG 3245 Query 117980 AATCACATCCTTCAT--CTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCT 118037 | || ||| | | | ||| ||||| || ||| |||| || ||| || || | Sbjct 3244 CA-CA-ATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCC 3187 Query 118038 GGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCC 118097 ||||| | ||| || ||||| || || ||| | | ||| | | |||||| | Sbjct 3186 GGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTG 3127 Query 118098 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 118157 | ||||| || || || | |||||||| || || | |||||||| |||| Sbjct 3126 TCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAAC 3067 Query 118158 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 118217 || ||||| || || | | ||||| |||| |||||| ||||| ||||| || ||| Sbjct 3066 TCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTG 3007 Query 118218 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277 || |||| ||| || | || || ||||| |||||||| |||| | || ||||| ||| Sbjct 3006 TTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGG 2947 Query 118278 AGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG--TCCCAGTCGTA--GTTGAGCTTTGT 118333 | || | ||| | || ||| ||||| |||||||| | | | || | Sbjct 2946 ACGCCGTGCTCCTTGATC--TTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC--GG 2891 Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393 || | | | |||||| || ||| || || || || ||| | || || |||||| | || Sbjct 2890 CTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGT 2831 Query 118394 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453 | |||| | |||||||| || |||| ||| | ||| ||| || ||||| || || Sbjct 2830 CGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGAT 2771 Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 118513 || ||||| || | || | || |||||| || ||||| | | || Sbjct 2770 GGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCGCAG 2711 Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 | | || |||| || || || || ||||| | ||||| || || || | ||| || Sbjct 2710 CGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTT 2651 Query 118574 AGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 ||| ||| |||| ||||| || | || ||| || | | || || || Sbjct 2650 GCTGTTCT---CGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTT 2594 Query 118631 TTTGGTGACAACCTT-TGTG--ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 118687 | ||||| | |||| | || || ||||| | | | || | ||||| Sbjct 2593 ---GCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTAC------GTCTC 2543 Query 118688 TTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 118741 | ||| ||| | || || || | || || || || ||||||| ||| Sbjct 2542 GTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTC 2483 Query 118742 ATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAA 118801 |||| || ||||||| | ||| |||||||||||||| || || |||||||| | Sbjct 2482 ATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAG 2423 Query 118802 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 118861 |||||| || || ||| |||||| |||||||| |||||| | || | ||||| Sbjct 2422 GTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGT 2363 Query 118862 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG 118920 |||||| || | || ||||| || | ||||| | || | || | || | | | Sbjct 2362 CTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGCGGC 2304 Query 118921 CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 118980 | || || || ||||||||| || ||||| |||||||| || || | | || | Sbjct 2303 CACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCG 2244 Query 118981 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCT 119040 || || || || | ||||| | || | ||| | || || ||||||||||| Sbjct 2243 CCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCT 2184 Query 119041 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 119100 ||||||| || || ||||||||||||||| ||| ||||| ||| ||| || || | Sbjct 2183 TCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCT 2124 Query 119101 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 119160 || || || |||| || | || || | || ||| || ||||| || || |||| Sbjct 2123 TGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGT 2064 Query 119161 ACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGT 119217 | | || | ||| || || |||||| ||||| | || ||| || Sbjct 2063 AGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGTGTTGT 2004 Query 119218 TAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACG 119275 | | ||||| ||||| || ||||| |||| ||| ||| ||||| || || || | Sbjct 2003 TGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGG 1944 Query 119276 AGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 119335 || | | || | || | ||||| || | ||||| || || ||| ||| ||||| Sbjct 1943 AGCC--GGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGAT 1886 Query 119336 TTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 119395 || || | |||| || | ||||| || || || |||| |||| | | | Sbjct 1885 CATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCAC 1826 Query 119396 GAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCG 119454 ||||||||| |||||||| |||||| ||||| || ||||||||||| || || | | Sbjct 1825 AAGGAAGCAGGATGACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGAGG 1767 Query 119455 CGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTC--CAAGACG-GCGGGAATGT 119511 | || |||| | | ||||| | || ||| ||||| | | ||| | | | | Sbjct 1766 CATGCGTGAAGAATTTGTTCGACATGTAGTTGTATGTCTCAACCACACGCTCCACATTAT 1707 Query 119512 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGA 119571 | ||| | || || | | || ||||||| ||||| || || || | | Sbjct 1706 CACCCCAG---ATGCCAACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCT 1650 Query 119572 TACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 | ||||||||| | | |||||| | ||||| ||||||| ||||||||| Sbjct 1649 TGCCATCGAGCTTGAGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATA 1598 >seq2400 Length=47555 Score = 109 bits (120), Expect = 7e-19 Identities = 301/459 (66%), Gaps = 22/459 (5%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || ||| | ||| |||||||| Sbjct 7934 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 7875 Query 129788 AAATCAAATGGGTTCTTTGA--GTTCCAA------ATTGCTGGCACTCCAATCTGTTTGA 129839 || || || ||||| | || | | || ||||| | | ||| | | Sbjct 7874 AAGTCGAAGGGGTTGGTGGAACGGTACACCTTATCATTGCCG--AGGGCAACC------A 7823 Query 129840 GGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGA 129899 | || || || | ||| |||||||||||| ||| ||||||||| |||| | Sbjct 7822 GAAGGCGGTCGGCAACGAACTCAATGTACTGCTTCATGAGTGTGGAGTTCATGCCGAGCA 7763 Query 129900 GGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGA 129959 | || || || || || || |||| ||| |||||| | ||||| || | | Sbjct 7762 GAGCGCAGGGAAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACAGCATCGACGATTA 7703 Query 129960 TGGCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---G 130016 | | || || ||||| ||| || | || || | ||| || || | | Sbjct 7702 TCTCCTGGATCATCTCCTTGCTGGGGCGGTTCTTCAGATGAGAGAACAG---CAGGCAAG 7646 Query 130017 CAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 130076 | || || ||| || ||||||||||| || || || || || |||||| ||| || | Sbjct 7645 CGAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAG 7586 Query 130077 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 130136 |||| || || |||||||||| |||||| || | | | || | || ||||||||| | Sbjct 7585 GCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGC 7526 Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||||||| || || || | || |||| |||||||| Sbjct 7525 CCTCCACAGCGGCAAAAGCGACCAGGCGCTGAGCAAAGG 7487 >seq1891 Length=26656 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 180882 CTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGTCATCGTAGTTTGT 180941 ||| || |||||||| || | ||||||||| | ||||||| ||||||||||||||| | Sbjct 18899 CTTTGCGCCGTAGCCGTTTCTGCCACCAACAGTCCTCTTCTCGTTGTCATCGTAGTTGGA 18958 Query 180942 ACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCTCCTTTTCGTGCAT 181001 | ||||| |||||||| || ||||| ||| | | | | ||| || | |||||| Sbjct 18959 GCCAGTGAGAAGGTGACCGAACAGCAGTTCGGGAATGTACACCTTCTCTTTCTGGTGCAT 19018 Query 181002 ACGAACACCGACACC 181016 |||| ||| ||| Sbjct 19019 CTCAACAACGATACC 19033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618414428307720