Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 255 7e-63
seq2400 131 2e-25
seq2561 98.7 1e-15
>seq2494
Length=11727
Score = 255 bits (282), Expect = 7e-63
Identities = 942/1447 (65%), Gaps = 59/1447 (4%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| | ||||||||||| | || || || || | | || |||
Sbjct 1664 CCGCAGCACATGATTATGCGCGTGGCAGTTGGCATCTGGGGTGATAATGTGGAGCGTGTG 1723
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341
| ||||||||| || | ||||| | | |||| || || | || || ||||||
Sbjct 1724 GTTGAGACATACAACTACATGTCGAACAAATTCTTCACGCATGCCTCGCCGACACTCTTC 1783
Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401
|| || || |||||| |||||||||| ||||||||| | | || ||||| |||
Sbjct 1784 AACGCCGGCACACCACAGGCCCAAATGTCATCCTGCTTCCTTGTGGACATAAAGGATGAC 1843
Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461
|| | |||||||||| || || | | ||||| ||||| ||| ||||||
Sbjct 1844 AGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCTCCAAGACGGCTGGT 1903
Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521
|| ||||| | || |||| | | | || | || ||| || |||||
Sbjct 1904 GGCATTGGCCTCAACGTCCACCGTATCCGGGCTACCGGCTCCTACATTGCCGGCACAAAC 1963
Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581
|| || |||| || || || ||||| || || | ||| ||| || ||||||||
Sbjct 1964 GGCACGTCCAATGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCTCGCTATGTG 2023
Query 104582 AATCAAGCTGGGCGTCGAAA---------GGGATCTATC-GCAGTCTATCTTGAGCCATG 104631
| || ||||| |||| ||| || || ||| |||| || ||||| ||
Sbjct 2024 GACCA----GGGCG--GAAACAAGCGCCCGGGCGCTTTCTGCA-TCTACCTAGAGCCTTG 2076
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691
||| || ||| || | ||||||||||| |||| ||||| || | |||||| |
Sbjct 2077 GCATGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAAAACCATGGCAAGGAGGAGATTC- 2135
Query 104692 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
|||| |||||||| ||| || |||||||| || ||||| ||||||||| | ||||||
Sbjct 2136 GTGCTCGCGATCTGTTCCTGGCGCTCTGGATCCCTGATCTGTTCATGAAGCGGGTTGAGA 2195
Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810
||| ||| | ||| | || | || || || || || ||||| | || | | |
Sbjct 2196 AGAACGGCGAGTGGACGCTGATGTGCCCCAACGAGTGTCCCGGTCTGGCGGACGTCTACG 2255
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACG 104869
| || |||||||| ||||| || ||||||||| |||||||| ||| | | |
Sbjct 2256 GCGACGAGTTTGAGGCCCTGTATGAGAAGTACGAGCGCGAAGGTCGTGGCCGC-AAAAAG 2314
Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928
|| | || | || | | ||| | || ||||| || |||| || ||||| || | ||
Sbjct 2315 GT-CAAGGCCCAGAAGCTCTGGTACGCAGTTCTCGAGGCTCAGACGGAGACGGGCAATCC 2373
Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988
| |||||| ||||| ||| |||||||| ||||| || || ||||| | || ||
Sbjct 2374 GTTCATGCTCTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACCTAGGCACCAT 2433
Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGAGACGGCT 105046
| || ||||| | || || || || |||| ||||| || |||||| |||
Sbjct 2434 CCGCAGCTCCAACTTGTGCACGGAGATTGTGGA--GTACAGTGCACCGGATGAGGTTGCT 2491
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACAT 105104
||||| ||||| || || | || || || | ||| || | | | |||| |||| |
Sbjct 2492 GTGTGCAACCTAGCTTCCCTAGCACTGCCGTCTTTTGTTGA-CTACA-ACAACGAGACGT 2549
Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTG-TCACCAAAAACCTAAACAGAGTT 105163
|| | | || |||||||| ||| | | | ||| | | ||||| ||| | |
Sbjct 2550 ACGACTTCAAGAAGCTCCACGAGGTTGC-ACAGCTGCTTGTCCGCAACCTGAACCGCATC 2608
Query 105164 ATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220
|||||| || | |||||||| ||| | | | | | | || ||| | ||||||
Sbjct 2609 ATTGATGTCAACTACTACCCCGTGCCGGAGGC--CGAGAACAGC-AACATGCGCCACCGT 2665
Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA--- 105277
|| |||||| | ||||| ||||| || || |||| ||| || ||| ||||
Sbjct 2666 CCTATTGGTTTGGGTGTGCAGGGGCTGGCAGATGCTTTC-----CTGGCGCTGCGCATGC 2720
Query 105278 --TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335
||||| || ||| || ||| |||| || || ||||||||||| || ||||
Sbjct 2721 CCTTTGAGTCGCCCGAGGCACGGGAGCTCAACAAGCAAATCTTTGAGACCATCTACCACG 2780
Query 105336 CCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395
||||||| ||| | || |||| || |||| || | |||| || | |||||
Sbjct 2781 CCGCTCTCACTGCGTCGTGCGACCTGGCCCAGATTGAGGGCACCTATGCGACGTATGAGG 2840
Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC 105455
| ||||| | || || || | || || || ||||||| | |||| || | |
Sbjct 2841 GCTCTCCTGTGTCTCAGGGAATTCTGCAGCCCGACATGTGGG-ACGTGAAGCC--GTCTG 2897
Query 105456 AC---TACGACTGGGA--AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510
|| | |||||||| |||| ||| ||||||||| | || | || |||||
Sbjct 2898 ACCTGTGGGACTGGGACTCGCTCCGTCTGAA--GATCAAGGAGCACGGCGTCCGCAACAG 2955
Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570
||| | |||| || ||||||||||| || || | || ||| |||| || || |||||
Sbjct 2956 TCTGTTGGTGGCCCCCATGCCAACAGCGTCGACGTCGCAGATCCTGGGCAACAACGAATG 3015
Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630
||| || || |||||| | |||||||| | | | || ||||| |||||| | |
Sbjct 3016 CTTCGAGCCGTACACGTCCAACATCTACTCGCGCCGTGTGCTGGCGGGCGAGTTTCAGGT 3075
Query 105631 TGTCAAC 105637
|||||||
Sbjct 3076 TGTCAAC 3082
>seq2400
Length=47555
Score = 131 bits (144), Expect = 2e-25
Identities = 159/214 (74%), Gaps = 6/214 (3%)
Strand=Plus/Plus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 94792
|||||| || || | ||||| || ||||||||| | |||||| | | | || ||
Sbjct 7425 AGTTCCTTGCATCCGCAAGAAGGCCGATTGGGCTCTCAAGTGGATCTCAGACCG---CGA 7481
Query 94793 GTTC--CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850
|| | ||||||| |||| || |||| ||||| ||| ||||| ||||||||| ||
Sbjct 7482 GTCCACCTTTGCTCAGCGCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGG 7541
Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910
| |||||| | || | ||||| |||||||| || || ||||| || || ||||||
Sbjct 7542 TGCCTTCTCTTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTC 7601
Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||||||| |||||||||||||| || |||
Sbjct 7602 CAACGAGCTTATTTCTCGTGACGAGGGCCTGCAC 7635
>seq2561
Length=10669
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
|||||| ||||| || |||||||||||||| || || | ||| ||| | |||||
Sbjct 8550 GGCATCGATCTCGTCGATGAAGACGATGCAGGGCGCGTTCTTGCGGGCGGTGGCGAAGAG 8491
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9821
||| || || ||| |||||| || || || |||||||| ||||| | | | || ||
Sbjct 8490 ATCGCGCACGCGCGAGGCGCCGACGCCGACGAACATCTCGACAAACTCGGAGCCGCTCAC 8431
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
| || |||||| || || || || || |||| ||| || || ||||| || |
Sbjct 8430 GCT-GAAGAAGGGCACGCCCGACTCGCCGGCGGTGGCCTTGGCCAGCAGCGTCTTGCCGG 8372
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
| || ||| || || |||| ||| || || ||||||||||||||
Sbjct 8371 TGCCGGGCGGCCCGGCCAGGATGGCGCCGCGCGGAATCTTGGCGCC 8326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583241209727880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |