Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2494 255 7e-63 seq2400 131 2e-25 seq2561 98.7 1e-15 >seq2494 Length=11727 Score = 255 bits (282), Expect = 7e-63 Identities = 942/1447 (65%), Gaps = 59/1447 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| | ||||||||||| | || || || || | | || ||| Sbjct 1664 CCGCAGCACATGATTATGCGCGTGGCAGTTGGCATCTGGGGTGATAATGTGGAGCGTGTG 1723 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||||||| || | ||||| | | |||| || || | || || |||||| Sbjct 1724 GTTGAGACATACAACTACATGTCGAACAAATTCTTCACGCATGCCTCGCCGACACTCTTC 1783 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || |||||| |||||||||| ||||||||| | | || ||||| ||| Sbjct 1784 AACGCCGGCACACCACAGGCCCAAATGTCATCCTGCTTCCTTGTGGACATAAAGGATGAC 1843 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || | |||||||||| || || | | ||||| ||||| ||| |||||| Sbjct 1844 AGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCTCCAAGACGGCTGGT 1903 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 || ||||| | || |||| | | | || | || ||| || ||||| Sbjct 1904 GGCATTGGCCTCAACGTCCACCGTATCCGGGCTACCGGCTCCTACATTGCCGGCACAAAC 1963 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 || || |||| || || || ||||| || || | ||| ||| || |||||||| Sbjct 1964 GGCACGTCCAATGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCTCGCTATGTG 2023 Query 104582 AATCAAGCTGGGCGTCGAAA---------GGGATCTATC-GCAGTCTATCTTGAGCCATG 104631 | || ||||| |||| ||| || || ||| |||| || ||||| || Sbjct 2024 GACCA----GGGCG--GAAACAAGCGCCCGGGCGCTTTCTGCA-TCTACCTAGAGCCTTG 2076 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 ||| || ||| || | ||||||||||| |||| ||||| || | |||||| | Sbjct 2077 GCATGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAAAACCATGGCAAGGAGGAGATTC- 2135 Query 104692 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 |||| |||||||| ||| || |||||||| || ||||| ||||||||| | |||||| Sbjct 2136 GTGCTCGCGATCTGTTCCTGGCGCTCTGGATCCCTGATCTGTTCATGAAGCGGGTTGAGA 2195 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 ||| ||| | ||| | || | || || || || || ||||| | || | | | Sbjct 2196 AGAACGGCGAGTGGACGCTGATGTGCCCCAACGAGTGTCCCGGTCTGGCGGACGTCTACG 2255 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACG 104869 | || |||||||| ||||| || ||||||||| |||||||| ||| | | | Sbjct 2256 GCGACGAGTTTGAGGCCCTGTATGAGAAGTACGAGCGCGAAGGTCGTGGCCGC-AAAAAG 2314 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || | || | || | | ||| | || ||||| || |||| || ||||| || | || Sbjct 2315 GT-CAAGGCCCAGAAGCTCTGGTACGCAGTTCTCGAGGCTCAGACGGAGACGGGCAATCC 2373 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | |||||| ||||| ||| |||||||| ||||| || || ||||| | || || Sbjct 2374 GTTCATGCTCTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACCTAGGCACCAT 2433 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGAGACGGCT 105046 | || ||||| | || || || || |||| ||||| || |||||| ||| Sbjct 2434 CCGCAGCTCCAACTTGTGCACGGAGATTGTGGA--GTACAGTGCACCGGATGAGGTTGCT 2491 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACAT 105104 ||||| ||||| || || | || || || | ||| || | | | |||| |||| | Sbjct 2492 GTGTGCAACCTAGCTTCCCTAGCACTGCCGTCTTTTGTTGA-CTACA-ACAACGAGACGT 2549 Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTG-TCACCAAAAACCTAAACAGAGTT 105163 || | | || |||||||| ||| | | | ||| | | ||||| ||| | | Sbjct 2550 ACGACTTCAAGAAGCTCCACGAGGTTGC-ACAGCTGCTTGTCCGCAACCTGAACCGCATC 2608 Query 105164 ATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 |||||| || | |||||||| ||| | | | | | | || ||| | |||||| Sbjct 2609 ATTGATGTCAACTACTACCCCGTGCCGGAGGC--CGAGAACAGC-AACATGCGCCACCGT 2665 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA--- 105277 || |||||| | ||||| ||||| || || |||| ||| || ||| |||| Sbjct 2666 CCTATTGGTTTGGGTGTGCAGGGGCTGGCAGATGCTTTC-----CTGGCGCTGCGCATGC 2720 Query 105278 --TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335 ||||| || ||| || ||| |||| || || ||||||||||| || |||| Sbjct 2721 CCTTTGAGTCGCCCGAGGCACGGGAGCTCAACAAGCAAATCTTTGAGACCATCTACCACG 2780 Query 105336 CCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 ||||||| ||| | || |||| || |||| || | |||| || | ||||| Sbjct 2781 CCGCTCTCACTGCGTCGTGCGACCTGGCCCAGATTGAGGGCACCTATGCGACGTATGAGG 2840 Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC 105455 | ||||| | || || || | || || || ||||||| | |||| || | | Sbjct 2841 GCTCTCCTGTGTCTCAGGGAATTCTGCAGCCCGACATGTGGG-ACGTGAAGCC--GTCTG 2897 Query 105456 AC---TACGACTGGGA--AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510 || | |||||||| |||| ||| ||||||||| | || | || ||||| Sbjct 2898 ACCTGTGGGACTGGGACTCGCTCCGTCTGAA--GATCAAGGAGCACGGCGTCCGCAACAG 2955 Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570 ||| | |||| || ||||||||||| || || | || ||| |||| || || ||||| Sbjct 2956 TCTGTTGGTGGCCCCCATGCCAACAGCGTCGACGTCGCAGATCCTGGGCAACAACGAATG 3015 Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630 ||| || || |||||| | |||||||| | | | || ||||| |||||| | | Sbjct 3016 CTTCGAGCCGTACACGTCCAACATCTACTCGCGCCGTGTGCTGGCGGGCGAGTTTCAGGT 3075 Query 105631 TGTCAAC 105637 ||||||| Sbjct 3076 TGTCAAC 3082 >seq2400 Length=47555 Score = 131 bits (144), Expect = 2e-25 Identities = 159/214 (74%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 94792 |||||| || || | ||||| || ||||||||| | |||||| | | | || || Sbjct 7425 AGTTCCTTGCATCCGCAAGAAGGCCGATTGGGCTCTCAAGTGGATCTCAGACCG---CGA 7481 Query 94793 GTTC--CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 || | ||||||| |||| || |||| ||||| ||| ||||| ||||||||| || Sbjct 7482 GTCCACCTTTGCTCAGCGCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGG 7541 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 | |||||| | || | ||||| |||||||| || || ||||| || || |||||| Sbjct 7542 TGCCTTCTCTTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTC 7601 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||||||| |||||||||||||| || ||| Sbjct 7602 CAACGAGCTTATTTCTCGTGACGAGGGCCTGCAC 7635 >seq2561 Length=10669 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 |||||| ||||| || |||||||||||||| || || | ||| ||| | ||||| Sbjct 8550 GGCATCGATCTCGTCGATGAAGACGATGCAGGGCGCGTTCTTGCGGGCGGTGGCGAAGAG 8491 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9821 ||| || || ||| |||||| || || || |||||||| ||||| | | | || || Sbjct 8490 ATCGCGCACGCGCGAGGCGCCGACGCCGACGAACATCTCGACAAACTCGGAGCCGCTCAC 8431 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | || |||||| || || || || || |||| ||| || || ||||| || | Sbjct 8430 GCT-GAAGAAGGGCACGCCCGACTCGCCGGCGGTGGCCTTGGCCAGCAGCGTCTTGCCGG 8372 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 | || ||| || || |||| ||| || || |||||||||||||| Sbjct 8371 TGCCGGGCGGCCCGGCCAGGATGGCGCCGCGCGGAATCTTGGCGCC 8326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583241209727880