Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 277 2e-69
seq2400 143 3e-29
seq1891 111 2e-19
>seq2494
Length=11727
Score = 277 bits (306), Expect = 2e-69
Identities = 501/723 (69%), Gaps = 10/723 (1%)
Strand=Plus/Plus
Query 53233 GCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAAC 53292
|||||| |||||| ||| ||| ||| | || | ||| ||||| ||| |||| ||
Sbjct 1717 GCGTGTGGTTGAGACATACAACTACATGTCGAACAAATTCTTCACGCATGCCTCGCCGAC 1776
Query 53293 CCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAA 53352
|| |||||||| || || || | || ||||| ||||||||| |||| || ||
Sbjct 1777 ACTCTTCAACGCCGGCACACCACAGGCCCAAATGTCATCCTGCTTCCTTGTGGACATAAA 1836
Query 53353 GGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTG 53412
||||||| || || || ||||| || || |||||| |||||| |||||||||
Sbjct 1837 GGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCTCCAAGAC 1896
Query 53413 GTCGGGTGGTATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAG 53470
| | ||||| || || || || || | ||| ||| || | |||| | ||
Sbjct 1897 GGCTGGTGGCATTGGCCTCAACG--TCCACCGTATCCGGGCTACCGGCTCCTACATTGCC 1954
Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530
|| || |||||| || |||| ||| | ||||||||||| |||| ||||||||||||
Sbjct 1955 GGCACAAACGGCACGTCCAATGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCT 2014
Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590
|| || || ||||||| || |||||| ||| | ||| ||||||||| |||||
Sbjct 2015 CGCTATGTGGACCAGGGCGGAAACAAGCGCCCGGGCGCTTTCTGCATCTACCTAGAGCCT 2074
Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650
||||| || || | | ||||| || || ||||| || || || | || |||||
Sbjct 2075 TGGCATGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAAAACCATGGCAAGGAGGAGATT 2134
Query 53651 CGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGA 53709
|| ||| || || ||||| || || ||||| || || || |||||| | ||| ||
Sbjct 2135 CG-TGCTCGCGATCTGTTCCTGGCGCTCTGGATCCCTGATCTGTTCATGAAGCGGGTTGA 2193
Query 53710 GAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTA 53769
|||| ||| |||||| ||||||||||| |||||||| ||||| || || |||||
Sbjct 2194 GAAGAACGGCGAGTGGACGCTGATGTGCCCCAACGAGTGTCCCGGTCTGGCGGACGTCTA 2253
Query 53770 CGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGA 53828
||| || |||||| | | ||||| || ||||| || | | || || | || |
Sbjct 2254 CGGCGACGAGTTTGAGGCCCTGTATGAGAAGTACG-AGCGCGAAGGTCGTGGCCGCAAAA 2312
Query 53829 AGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGC 53888
|||||||||| | || | ||| | ||| | ||| || ||| ||||||||| | |
Sbjct 2313 AGGTCAAGGCCCAGAAGCTCTGGTACGCAGTTCTCGAGGCTCAGACGGAGACGGGCAATC 2372
Query 53889 CGTACATGTGCTACAAGGA-TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTC 53947
||| |||| ||||||||| | || ||| |||||||||||||||||| | ||| |
Sbjct 2373 CGTTCATGCTCTACAAGGACCACTGT-AACCGCAAGAGCAACCAGAAGAACCTAGGCACC 2431
Query 53948 ATC 53950
|||
Sbjct 2432 ATC 2434
Score = 116 bits (128), Expect = 4e-21
Identities = 306/456 (67%), Gaps = 17/456 (4%)
Strand=Plus/Plus
Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537
||| | |||||| ||| | ||||| || |||||||| ||||||||| | |||||| ||
Sbjct 2942 GGCGTCCGCAACAGTCTGTTGGTGGCCCCCATGCCAACAGCGTCGACGTCGCAGATCCTG 3001
Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597
||||||||||| ||||||||||||||| ||||||||||| |||||| || ||
Sbjct 3002 GGCAACAACGAATGCTTCGAGCCGTACACGTCCAACATCTACTCGCGCCGTGTGCTGGCG 3061
Query 55598 GGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG 55657
|| |||||| | ||||| | || | ||||| || | || ||||
Sbjct 3062 GGCGAGTTTCAGGTTGTCAACCCGTGGCTGCTGAAGGATCTCGTTGATATGGGGCTGTGG 3121
Query 55658 AACCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCG-TCCAGA--ATCTGG 55712
| || |||| || || | ||| || ||| ||| || |||||| |||
Sbjct 3122 TCGGACAACATGAAGAACCGCATCAT-TGCCGA--GGGCGGTTCGATCCAGAACATCCCC 3178
Query 55713 AGATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG---AAG 55768
| ||| || | |||||| | ||| ||| || |||||||| | ||| | |
Sbjct 3179 AACATCCCGGCCGACATCAAGGCTCTGTACAAGACCGTTTGGGAGATCTCGCAGCGCACG 3238
Query 55769 AGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAAC 55828
| | || | ||| || || ||||| |||| |||||||||||| ||||| || |||
Sbjct 3239 ATTGTG---CAGATGGCGGCCGACCGTGGCGCGTTCATCGACCAGTCGCAGTCGCTCAAC 3295
Query 55829 ATCTTCATG-GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAA 55887
|| |||| | || || || ||| |||| | | |||||||| ||| |||||
Sbjct 3296 ATTCACATGCGTGAGCCCACCA-TGGGCAAGATCACAAGCATGCACTTCACCGGCTGGAA 3354
Query 55888 GAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923
| ||| || |||||||| |||||||| ||||| ||
Sbjct 3355 GCTGGGCCTGAAGACGGGAATGTACTACCTGCGCAC 3390
>seq2400
Length=47555
Score = 143 bits (158), Expect = 3e-29
Identities = 313/460 (68%), Gaps = 19/460 (4%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| |||||||| ||||| || || ||||||||||| || ||| ||||||||||||||
Sbjct 7934 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 7875
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579
||||||| ||||| | | || ||| | ||| || || | ||| |||
Sbjct 7874 AAGTCGAAGGGGTTGGTGGAACGGTACAC---CTTATCATTGCCGAGGGCAACCAGAAGG 7818
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
|| || || || || | |||||||||| |||| | | | |||||||| || |
Sbjct 7817 CGGTCGGCAACGAACTCAATGTACTGCTTCATGAGTGTGGAGTTCATGCCGAGCAGAGCG 7758
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTG--GACAATCT 74697
|| || || |||||||||| ||||| ||| | || | ||| || | || ||||
Sbjct 7757 CAGGGAAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACAGC--ATCGACGATTATCT 7700
Query 74698 TGTGAATG---TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCA 74753
|| || || ||| |||| || | |||| |||||| | ||| | || | |
Sbjct 7699 CCTGGATCATCTCCTTGCTGGGGCGGTTCT---TCAGATGAGAGAACAGCAGGCAAG-CG 7644
Query 74754 AACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGC 74813
|| || ||| ||| || || | || | || || || || | |||||||||
Sbjct 7643 AAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAGGC 7584
Query 74814 ATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCT 74873
|| || || |||||||||| ||| ||||||| | |||||| ||| ||||||||||||||
Sbjct 7583 ATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGCCC 7524
Query 74874 TCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG 74913
|| ||| ||||| ||||| ||||| || || || ||||
Sbjct 7523 TCCACAGCGGCAAAAGCGACCAGGCGCTGAGC-AAAGGTG 7485
>seq1891
Length=26656
Score = 111 bits (122), Expect = 2e-19
Identities = 284/424 (67%), Gaps = 10/424 (2%)
Strand=Plus/Plus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
||||| || ||||| || || ||||| ||||| | ||| ||||||| || | ||| |
Sbjct 16824 CCAGTGCCAATACCGTCGGCTCCATTGATCAGGACCATGGGCACGATTGGGGCATAGTTC 16883
Query 117212 TCAGGCTCCACCTG-CAG-ACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCG 117269
| ||||| | || || ||| ||||| || || | ||| || | | || |
Sbjct 16884 TTTGGCTCGA--TGACACTACCTTCGTCGATGTTGTTTTCGAGGACGGGTTCATCCAGAG 16941
Query 117270 GATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAG 117329
||| ||| | | || | || | || |||||||||||||| |||| || ||||
Sbjct 16942 GATTGAAAACGCGGCGGGCAAATGGCGACAGACGAGTGAAAATGTATCGAGCACTAGCAG 17001
Query 117330 CATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGA-GGTTCAGG 117388
| || |||||| | |||||| | |||||| | || || || | ||||| || | |
Sbjct 17002 CGTCAGAGCCACCGGAAAGACGAGAACCGAAGTTACCGCT-GGGTTCAAGACAATTGATG 17060
Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448
||||||| ||| |||||||| || |||| | ||||| || || ||| ||| ||
Sbjct 17061 TTGTTGGAGCCGACAAAGTTCTGCGCCAGGCCCACAATGGTCTGATGCAGGGACGCATCG 17120
Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTC--ATGT 117506
|| ||||| || | | | ||| | ||| |||| |||| || ||| ||| ||
Sbjct 17121 CCGTGGTGGTAAGAAGCCAGCTTAGACACCGAGCCAGCCAACTCGAACACTTTCTGATCC 17180
Query 117507 CTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGAC 117566
|||| | ||||||||| || || | || || |||||||| || | ||||||||||
Sbjct 17181 TTGAC--AATGTTCTTCTTCAGACACGTGTAGATGACCTTGCGTTGGCCGGGCTTCAGAC 17238
Query 117567 CATC 117570
| ||
Sbjct 17239 CGTC 17242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547197620382600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |