Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2494 277 2e-69 seq2400 143 3e-29 seq1891 111 2e-19 >seq2494 Length=11727 Score = 277 bits (306), Expect = 2e-69 Identities = 501/723 (69%), Gaps = 10/723 (1%) Strand=Plus/Plus Query 53233 GCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAAC 53292 |||||| |||||| ||| ||| ||| | || | ||| ||||| ||| |||| || Sbjct 1717 GCGTGTGGTTGAGACATACAACTACATGTCGAACAAATTCTTCACGCATGCCTCGCCGAC 1776 Query 53293 CCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAA 53352 || |||||||| || || || | || ||||| ||||||||| |||| || || Sbjct 1777 ACTCTTCAACGCCGGCACACCACAGGCCCAAATGTCATCCTGCTTCCTTGTGGACATAAA 1836 Query 53353 GGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTG 53412 ||||||| || || || ||||| || || |||||| |||||| ||||||||| Sbjct 1837 GGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCTCCAAGAC 1896 Query 53413 GTCGGGTGGTATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAG 53470 | | ||||| || || || || || | ||| ||| || | |||| | || Sbjct 1897 GGCTGGTGGCATTGGCCTCAACG--TCCACCGTATCCGGGCTACCGGCTCCTACATTGCC 1954 Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530 || || |||||| || |||| ||| | ||||||||||| |||| |||||||||||| Sbjct 1955 GGCACAAACGGCACGTCCAATGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCT 2014 Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590 || || || ||||||| || |||||| ||| | ||| ||||||||| ||||| Sbjct 2015 CGCTATGTGGACCAGGGCGGAAACAAGCGCCCGGGCGCTTTCTGCATCTACCTAGAGCCT 2074 Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650 ||||| || || | | ||||| || || ||||| || || || | || ||||| Sbjct 2075 TGGCATGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAAAACCATGGCAAGGAGGAGATT 2134 Query 53651 CGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGA 53709 || ||| || || ||||| || || ||||| || || || |||||| | ||| || Sbjct 2135 CG-TGCTCGCGATCTGTTCCTGGCGCTCTGGATCCCTGATCTGTTCATGAAGCGGGTTGA 2193 Query 53710 GAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTA 53769 |||| ||| |||||| ||||||||||| |||||||| ||||| || || ||||| Sbjct 2194 GAAGAACGGCGAGTGGACGCTGATGTGCCCCAACGAGTGTCCCGGTCTGGCGGACGTCTA 2253 Query 53770 CGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGA 53828 ||| || |||||| | | ||||| || ||||| || | | || || | || | Sbjct 2254 CGGCGACGAGTTTGAGGCCCTGTATGAGAAGTACG-AGCGCGAAGGTCGTGGCCGCAAAA 2312 Query 53829 AGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGC 53888 |||||||||| | || | ||| | ||| | ||| || ||| ||||||||| | | Sbjct 2313 AGGTCAAGGCCCAGAAGCTCTGGTACGCAGTTCTCGAGGCTCAGACGGAGACGGGCAATC 2372 Query 53889 CGTACATGTGCTACAAGGA-TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTC 53947 ||| |||| ||||||||| | || ||| |||||||||||||||||| | ||| | Sbjct 2373 CGTTCATGCTCTACAAGGACCACTGT-AACCGCAAGAGCAACCAGAAGAACCTAGGCACC 2431 Query 53948 ATC 53950 ||| Sbjct 2432 ATC 2434 Score = 116 bits (128), Expect = 4e-21 Identities = 306/456 (67%), Gaps = 17/456 (4%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||| | |||||| ||| | ||||| || |||||||| ||||||||| | |||||| || Sbjct 2942 GGCGTCCGCAACAGTCTGTTGGTGGCCCCCATGCCAACAGCGTCGACGTCGCAGATCCTG 3001 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 ||||||||||| ||||||||||||||| ||||||||||| |||||| || || Sbjct 3002 GGCAACAACGAATGCTTCGAGCCGTACACGTCCAACATCTACTCGCGCCGTGTGCTGGCG 3061 Query 55598 GGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG 55657 || |||||| | ||||| | || | ||||| || | || |||| Sbjct 3062 GGCGAGTTTCAGGTTGTCAACCCGTGGCTGCTGAAGGATCTCGTTGATATGGGGCTGTGG 3121 Query 55658 AACCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCG-TCCAGA--ATCTGG 55712 | || |||| || || | ||| || ||| ||| || |||||| ||| Sbjct 3122 TCGGACAACATGAAGAACCGCATCAT-TGCCGA--GGGCGGTTCGATCCAGAACATCCCC 3178 Query 55713 AGATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG---AAG 55768 | ||| || | |||||| | ||| ||| || |||||||| | ||| | | Sbjct 3179 AACATCCCGGCCGACATCAAGGCTCTGTACAAGACCGTTTGGGAGATCTCGCAGCGCACG 3238 Query 55769 AGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAAC 55828 | | || | ||| || || ||||| |||| |||||||||||| ||||| || ||| Sbjct 3239 ATTGTG---CAGATGGCGGCCGACCGTGGCGCGTTCATCGACCAGTCGCAGTCGCTCAAC 3295 Query 55829 ATCTTCATG-GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAA 55887 || |||| | || || || ||| |||| | | |||||||| ||| ||||| Sbjct 3296 ATTCACATGCGTGAGCCCACCA-TGGGCAAGATCACAAGCATGCACTTCACCGGCTGGAA 3354 Query 55888 GAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 | ||| || |||||||| |||||||| ||||| || Sbjct 3355 GCTGGGCCTGAAGACGGGAATGTACTACCTGCGCAC 3390 >seq2400 Length=47555 Score = 143 bits (158), Expect = 3e-29 Identities = 313/460 (68%), Gaps = 19/460 (4%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || |||||||| ||||| || || ||||||||||| || ||| |||||||||||||| Sbjct 7934 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 7875 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579 ||||||| ||||| | | || ||| | ||| || || | ||| ||| Sbjct 7874 AAGTCGAAGGGGTTGGTGGAACGGTACAC---CTTATCATTGCCGAGGGCAACCAGAAGG 7818 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 || || || || || | |||||||||| |||| | | | |||||||| || | Sbjct 7817 CGGTCGGCAACGAACTCAATGTACTGCTTCATGAGTGTGGAGTTCATGCCGAGCAGAGCG 7758 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTG--GACAATCT 74697 || || || |||||||||| ||||| ||| | || | ||| || | || |||| Sbjct 7757 CAGGGAAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACAGC--ATCGACGATTATCT 7700 Query 74698 TGTGAATG---TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCA 74753 || || || ||| |||| || | |||| |||||| | ||| | || | | Sbjct 7699 CCTGGATCATCTCCTTGCTGGGGCGGTTCT---TCAGATGAGAGAACAGCAGGCAAG-CG 7644 Query 74754 AACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGC 74813 || || ||| ||| || || | || | || || || || | ||||||||| Sbjct 7643 AAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAGGC 7584 Query 74814 ATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCT 74873 || || || |||||||||| ||| ||||||| | |||||| ||| |||||||||||||| Sbjct 7583 ATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGCCC 7524 Query 74874 TCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG 74913 || ||| ||||| ||||| ||||| || || || |||| Sbjct 7523 TCCACAGCGGCAAAAGCGACCAGGCGCTGAGC-AAAGGTG 7485 >seq1891 Length=26656 Score = 111 bits (122), Expect = 2e-19 Identities = 284/424 (67%), Gaps = 10/424 (2%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| || ||||| || || ||||| ||||| | ||| ||||||| || | ||| | Sbjct 16824 CCAGTGCCAATACCGTCGGCTCCATTGATCAGGACCATGGGCACGATTGGGGCATAGTTC 16883 Query 117212 TCAGGCTCCACCTG-CAG-ACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCG 117269 | ||||| | || || ||| ||||| || || | ||| || | | || | Sbjct 16884 TTTGGCTCGA--TGACACTACCTTCGTCGATGTTGTTTTCGAGGACGGGTTCATCCAGAG 16941 Query 117270 GATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAG 117329 ||| ||| | | || | || | || |||||||||||||| |||| || |||| Sbjct 16942 GATTGAAAACGCGGCGGGCAAATGGCGACAGACGAGTGAAAATGTATCGAGCACTAGCAG 17001 Query 117330 CATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGA-GGTTCAGG 117388 | || |||||| | |||||| | |||||| | || || || | ||||| || | | Sbjct 17002 CGTCAGAGCCACCGGAAAGACGAGAACCGAAGTTACCGCT-GGGTTCAAGACAATTGATG 17060 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448 ||||||| ||| |||||||| || |||| | ||||| || || ||| ||| || Sbjct 17061 TTGTTGGAGCCGACAAAGTTCTGCGCCAGGCCCACAATGGTCTGATGCAGGGACGCATCG 17120 Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTC--ATGT 117506 || ||||| || | | | ||| | ||| |||| |||| || ||| ||| || Sbjct 17121 CCGTGGTGGTAAGAAGCCAGCTTAGACACCGAGCCAGCCAACTCGAACACTTTCTGATCC 17180 Query 117507 CTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGAC 117566 |||| | ||||||||| || || | || || |||||||| || | |||||||||| Sbjct 17181 TTGAC--AATGTTCTTCTTCAGACACGTGTAGATGACCTTGCGTTGGCCGGGCTTCAGAC 17238 Query 117567 CATC 117570 | || Sbjct 17239 CGTC 17242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547197620382600