Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 176 6e-39
>seq2494
Length=11727
Score = 176 bits (194), Expect = 6e-39
Identities = 474/717 (66%), Gaps = 20/717 (3%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| || || || | || || ||| ||| ||||| || || || ||||||| | |
Sbjct 2268 TCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTC 2209
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
||||| || | | || |||||| ||||| || |||||||| ||||| || || | ||
Sbjct 2208 CACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAAC 2149
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA---AGATCTAGGAACTCC 76696
||||| || | | | || || || || || ||||| || || ||||||||
Sbjct 2148 AGATCGCGAGCACGAATCTCCTCCTTGCC---ATGGTTTTTGCGCAGGTCAAGGAACTCA 2092
Query 76697 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCT 76756
| | ||||| |||||| || ||||| || || | | | ||||| || || || ||
Sbjct 2091 AAGACATCAGCATGCCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCG 2032
Query 76757 CCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTA 76816
||||| || | ||| | || ||||| || || || | | ||| || || ||||| ||
Sbjct 2031 CCCTGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTG 1972
Query 76817 GATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGG 76876
|| || || ||||| || | ||| || || || || ||| | |||
Sbjct 1971 GACGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCCCGGATACGGTGGACGTTGAGG 1912
Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936
|| || || || ||| | || ||||| | |||||| || | ||||||||||| |||
Sbjct 1911 CCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCC 1852
Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996
|| || || |||||| | |||| | ||| || ||| |||||||| || ||
Sbjct 1851 TCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTGTGGTGTG 1792
Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT-TTCAGAAAGTAGATTGTA 77055
|| || || || | ||| || || ||||| ||||| |||| ||| | |||| |||||
Sbjct 1791 CCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAATTTGTTCGACATGTAG-TTGTA 1733
Query 77056 TGTTTCAATAAC-TGCTTC----TAT-ATCCCATTGATGAATTCCTACAGCGACACGCAT 77109
||| |||| || ||| | ||| | |||| |||| || || || || |||||
Sbjct 1732 TGTCTCAACCACACGCTCCACATTATCACCCCA--GATG----CCAACTGCCACGCGCAT 1679
Query 77110 CAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 77169
| ||| ||||| || || || ||| |||| || | || | | ||| || ||
Sbjct 1678 AATCATGTGCTGCGGCCGCTCGACAATCTTGCCATCGAGCTTGAGTAGGTAAGACCGCTC 1619
Query 77170 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGA 77226
|| || || ||||||||||| | ||| ||||| | ||||| | ||| ||||
Sbjct 1618 CAGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGA 1562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712910454315840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |