Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2494 176 6e-39 >seq2494 Length=11727 Score = 176 bits (194), Expect = 6e-39 Identities = 474/717 (66%), Gaps = 20/717 (3%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || | || || ||| ||| ||||| || || || ||||||| | | Sbjct 2268 TCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTC 2209 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 ||||| || | | || |||||| ||||| || |||||||| ||||| || || | || Sbjct 2208 CACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAAC 2149 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA---AGATCTAGGAACTCC 76696 ||||| || | | | || || || || || ||||| || || |||||||| Sbjct 2148 AGATCGCGAGCACGAATCTCCTCCTTGCC---ATGGTTTTTGCGCAGGTCAAGGAACTCA 2092 Query 76697 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCT 76756 | | ||||| |||||| || ||||| || || | | | ||||| || || || || Sbjct 2091 AAGACATCAGCATGCCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCG 2032 Query 76757 CCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTA 76816 ||||| || | ||| | || ||||| || || || | | ||| || || ||||| || Sbjct 2031 CCCTGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTG 1972 Query 76817 GATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGG 76876 || || || ||||| || | ||| || || || || ||| | ||| Sbjct 1971 GACGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCCCGGATACGGTGGACGTTGAGG 1912 Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 || || || || ||| | || ||||| | |||||| || | ||||||||||| ||| Sbjct 1911 CCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCC 1852 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || || || |||||| | |||| | ||| || ||| |||||||| || || Sbjct 1851 TCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTGTGGTGTG 1792 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT-TTCAGAAAGTAGATTGTA 77055 || || || || | ||| || || ||||| ||||| |||| ||| | |||| ||||| Sbjct 1791 CCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAATTTGTTCGACATGTAG-TTGTA 1733 Query 77056 TGTTTCAATAAC-TGCTTC----TAT-ATCCCATTGATGAATTCCTACAGCGACACGCAT 77109 ||| |||| || ||| | ||| | |||| |||| || || || || ||||| Sbjct 1732 TGTCTCAACCACACGCTCCACATTATCACCCCA--GATG----CCAACTGCCACGCGCAT 1679 Query 77110 CAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 77169 | ||| ||||| || || || ||| |||| || | || | | ||| || || Sbjct 1678 AATCATGTGCTGCGGCCGCTCGACAATCTTGCCATCGAGCTTGAGTAGGTAAGACCGCTC 1619 Query 77170 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGA 77226 || || || ||||||||||| | ||| ||||| | ||||| | ||| |||| Sbjct 1618 CAGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGA 1562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712910454315840