Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1920 149 5e-31
seq2379 140 2e-28
seq1979 114 9e-21
>seq1920
Length=25525
Score = 149 bits (164), Expect = 5e-31
Identities = 162/213 (76%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||||||||||| |||||||||||||||| ||| || | || ||
Sbjct 16736 CACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGAGTCCGTCCATCTTC 16795
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| |||||||| |||||||| || | || | || ||||| |||
Sbjct 16796 TAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 16855
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | || |||||| | || ||||| | ||||| |||
Sbjct 16856 GATCTTGGACTTGACATTGT--CGATAGTGTCGCTGCTCTCGACCTCAAGGGTAATTGTC 16913
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||||||| ||||||||||| ||||||
Sbjct 16914 TTACCCGTGAGGGTTTTCACGAAGATCTGCATG 16946
>seq2379
Length=13478
Score = 140 bits (154), Expect = 2e-28
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | || || || || || ||| |||||| ||||||||||||||
Sbjct 4555 CATACCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATC 4614
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| |||| || |||||||| |||||||| |||| |||||||||||| |
Sbjct 4615 GGAGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGG 4674
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | ||||| || | || ||
Sbjct 4675 GGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTC 4734
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||||| | || || ||||| || ||||||||||| ||||| || |||||||||
Sbjct 4735 GACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCATGATG 4789
Score = 122 bits (134), Expect = 6e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| ||||| ||||| ||||| ||||| || | ||| ||| |||| ||
Sbjct 3892 CACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCGTCCTC 3951
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || ||||| || | |||||||| |||| || | || ||||| |||
Sbjct 3952 CAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 4011
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||||| | | || || || | || || ||||||| |||||||||||
Sbjct 4012 AATCTTCGACTTCACGTTGTCAATCGTATCTGATGACTCAACCTCCAAGGTAATCGTCTT 4071
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| ||||| || |||||
Sbjct 4072 CCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | || |||||||||||| || ||||| ||||||||||| ||
Sbjct 4099 CATACCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTC 4158
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || |||| |||||| || || ||||| | |||||||| ||||
Sbjct 4159 CGATAGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGG 4218
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| || || ||||| | | || ||||| | || ||
Sbjct 4219 CGGGATGCCCTCCTTGTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTC 4278
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||||| || |||||||| ||||| || ||||| ||||| || ||||||
Sbjct 4279 CACCTCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCATG 4330
>seq1979
Length=23555
Score = 114 bits (126), Expect = 9e-21
Identities = 149/204 (73%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || || |||||| ||||| ||||| || | || || |||| ||
Sbjct 2792 CACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAGGGTACGGCCGTCCTC 2851
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || |||||||||| |||||||| || | || | || ||||| |||
Sbjct 2852 GAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 2911
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | || ||||| | ||| || ||||||| || || |||
Sbjct 2912 GATCTTGGACTTGACATTGT--CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 2969
Query 44306 TTTCCCGTGAGGGTCTTCACGAAG 44329
|| ||||| |||||||||||||||
Sbjct 2970 TTGCCCGTAAGGGTCTTCACGAAG 2993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359978611101879
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |