Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1920 149 5e-31 seq2379 140 2e-28 seq1979 114 9e-21 >seq1920 Length=25525 Score = 149 bits (164), Expect = 5e-31 Identities = 162/213 (76%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||||||||||| |||||||||||||||| ||| || | || || Sbjct 16736 CACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGAGTCCGTCCATCTTC 16795 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| |||||||| |||||||| || | || | || ||||| ||| Sbjct 16796 TAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 16855 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || |||||| | || ||||| | ||||| ||| Sbjct 16856 GATCTTGGACTTGACATTGT--CGATAGTGTCGCTGCTCTCGACCTCAAGGGTAATTGTC 16913 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||||||| ||||||||||| |||||| Sbjct 16914 TTACCCGTGAGGGTTTTCACGAAGATCTGCATG 16946 >seq2379 Length=13478 Score = 140 bits (154), Expect = 2e-28 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || || || || || ||| |||||| |||||||||||||| Sbjct 4555 CATACCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATC 4614 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| |||| || |||||||| |||||||| |||| |||||||||||| | Sbjct 4615 GGAGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGG 4674 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||| | | | ||||| || | || || Sbjct 4675 GGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTC 4734 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| | || || ||||| || ||||||||||| ||||| || ||||||||| Sbjct 4735 GACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCATGATG 4789 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| ||||| ||||| ||||| ||||| || | ||| ||| |||| || Sbjct 3892 CACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCGTCCTC 3951 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || ||||| || | |||||||| |||| || | || ||||| ||| Sbjct 3952 CAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 4011 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | || || || | || || ||||||| ||||||||||| Sbjct 4012 AATCTTCGACTTCACGTTGTCAATCGTATCTGATGACTCAACCTCCAAGGTAATCGTCTT 4071 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| ||||| || ||||| Sbjct 4072 CCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | || |||||||||||| || ||||| ||||||||||| || Sbjct 4099 CATACCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTC 4158 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || |||| |||||| || || ||||| | |||||||| |||| Sbjct 4159 CGATAGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGG 4218 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| || || ||||| | | || ||||| | || || Sbjct 4219 CGGGATGCCCTCCTTGTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTC 4278 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| || |||||||| ||||| || ||||| ||||| || |||||| Sbjct 4279 CACCTCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCATG 4330 >seq1979 Length=23555 Score = 114 bits (126), Expect = 9e-21 Identities = 149/204 (73%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || || |||||| ||||| ||||| || | || || |||| || Sbjct 2792 CACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAGGGTACGGCCGTCCTC 2851 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || |||||||||| |||||||| || | || | || ||||| ||| Sbjct 2852 GAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 2911 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||| | ||| || ||||||| || || ||| Sbjct 2912 GATCTTGGACTTGACATTGT--CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 2969 Query 44306 TTTCCCGTGAGGGTCTTCACGAAG 44329 || ||||| ||||||||||||||| Sbjct 2970 TTGCCCGTAAGGGTCTTCACGAAG 2993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359978611101879