Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq2379 167 2e-36
seq1920 161 9e-35
seq1979 125 7e-24
>seq2379
Length=13478
Score = 167 bits (184), Expect = 2e-36
Identities = 178/230 (77%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | |||||| |||||||| |||||||| || || ||||| ||
Sbjct 3874 GCCGCCACGCAGACGAAGCACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGA 3933
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||||||| |||| || ||||||||||| || || || || ||||| ||||| | |||
Sbjct 3934 GAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGGTCTGGGGG 3993
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
|| || |||||||||| ||| | || | |||| ||| | | | || || |||||
Sbjct 3994 AATGCCCTCCTTGTCC-TGAATCTTCGACTTC-ACGTTGTCAATCGTATCTGATGACTCA 4051
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || ||||| || || ||||||||||| ||||||||||||||
Sbjct 4052 ACCTCCAAGGTAATCGTCTTCCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101
Score = 154 bits (170), Expect = 1e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||| || || || |||||||| ||||| ||||| ||
Sbjct 4103 CCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGAT 4162
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || | ||||||||| ||||| || |||||||| ||||| | ||
Sbjct 4163 AGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGCGGG 4222
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCAC 41814
| || |||||||||| |||||| ||||| | | || ||||| |||||||||
Sbjct 4223 ATGCCCTCCTTGTCCTGGATTTTAGACTTCA-CATTGTCAATCGTGTCCGACGACTCCAC 4281
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| || ||||| || ||||| ||||||||||||||||||||||||
Sbjct 4282 CTCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCATG 4330
Score = 154 bits (170), Expect = 1e-32
Identities = 175/233 (75%), Gaps = 10/233 (4%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| || || | |||||| |||||||| ||||||||||||||| ||||| ||
Sbjct 4330 GCCACCGCGGAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGA 4389
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||| || | || || ||||||||||| ||||| ||||||||||| ||||| | ||
Sbjct 4390 AAGGGTCCGTCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGTGG 4449
Query 41755 AACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGAC 41809
| | |||||||||| ||| || ||| | | | ||| | ||||| ||||
Sbjct 4450 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATG-----GTGTCCGACGAC 4504
Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| ||||||| || || || || || ||||||||||| ||||| ||||||||
Sbjct 4505 TCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 4557
Score = 149 bits (164), Expect = 6e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | || |||||||| ||| ||||||||| ||||| || ||||||
Sbjct 4559 CCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAG 4618
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||||||||| ||||| || ||||| ||||| || |||| |||
Sbjct 4619 AGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGG 4678
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || | | ||| | | | || || ||||| ||
Sbjct 4679 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGAC 4737
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||| | || || || || || || || ||||| |||||||||||||||
Sbjct 4738 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCATG 4786
>seq1920
Length=25525
Score = 161 bits (178), Expect = 9e-35
Identities = 176/232 (76%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| || || || |||| |||||| || || |||||||||||||| ||||| || ||||
Sbjct 16717 CGCCACCACGGAGCCGTAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGG 16776
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
|||| || || | || || ||||||||||||||||| |||| |||||| ||||| | |
Sbjct 16777 AGAGAGTCCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCG 16836
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTC 41811
| | || |||||||||| ||| || ||| || | || | ||||||||| |||
Sbjct 16837 GGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATAGTGTCGCTGCTCTC 16894
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| | || || || |||||||| || || || ||||| |||||||||
Sbjct 16895 GACCTCAAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATG 16946
>seq1979
Length=23555
Score = 125 bits (138), Expect = 7e-24
Identities = 161/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||| ||||| || ||||||||| || || ||||| ||
Sbjct 2775 CCACCACGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGAC 2834
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| |||||||||||||| || || ||||||||||| ||||| | ||
Sbjct 2835 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 2894
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| || | || | ||||| ||||| |
Sbjct 2895 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATCGTGTCCGAGGACTCGA 2952
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853
|||||| || || || || ||||| || ||||| |||||
Sbjct 2953 CCTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 2992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462288472364400
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