Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq13 295 6e-75 seq497 192 5e-44 seq246 113 4e-20 >seq13 Length=329804 Score = 295 bits (326), Expect = 6e-75 Identities = 938/1431 (66%), Gaps = 36/1431 (3%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510 |||| || ||||| ||||| || | |||| || ||||| || |||||| |||| | Sbjct 257029 GGTTGACAACTTGGAACTCACCCG-CAAGCACACGGCGCGAATAGATGTTGCTTGTGTAT 256971 Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570 |||||||| |||| ||| ||||| ||||| | ||||||||| || ||||| || || Sbjct 256970 GGTTCGAAGCATTCGTTGAATCCCATGATCTGGGAGGTCGAAGCAGTTGGCATTGGGGCA 256911 Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCC 22630 | || || ||||| | || ||| | | ||| || ||||| | ||| ||| Sbjct 256910 ACGAGGAGAGAGTTACGCACACCGGTTTGCGCAATCTTCGCTTTGAGGGCAGCCCAATCC 256851 Query 22631 CACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCC 22690 || ||||| | || || ||| ||||||| |||||||| | | | || | | | | Sbjct 256850 CAAAGATCAGTGGGGGTGACAC---CCCACATGTCGTATTGAAGCTCACC-CTTCGAGAC 256795 Query 22691 GGGCT-GCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || ||||||||| || ||||| |||||| | | || || |||| ||| Sbjct 256794 AGGTGAGCCTTCGTAGGTCTCGTAAGGACCAAGCTTTTCAGCGAGATCGCTAGACGCGGT 256735 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GC----GGCG 22804 ||| ||| ||| || |||||||||||||||| |||| | | |||| || || | Sbjct 256734 CAAAGCGGCGTGGTAGATAGTCTCGAAGATTTGGATGTTGAGCT-GGCGTGCTTCAGGAG 256676 Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864 | ||| | ||||| |||| | ||| || || |||| ||| | || || | | Sbjct 256675 AG----TCGAATGGCATGCGCAGGGCGAGGAAAGCATCTGCCAAACCATTGACACCAAGA 256620 Query 22865 CCGATCGGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCG 22922 || ||||| |||| | || | ||| | |||| || | ||| || || Sbjct 256619 CCAATCGGACGGTGGCGGAAGTTG--CCCTTGCGAGCCTCAGGTACAGGGTATTTGTTGA 256562 Query 22923 AATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAA 22982 || || | |||||||||||||||| || | | |||| | | Sbjct 256561 CCTCAATGATCTTGTTCAAGTTTCTGGTAACGACCTGGGTTACTTCGTGGAGCTTCTTGA 256502 Query 22983 AGTCGTAAACGCCCGAT-TGTACAACAAACTTGTT-GACGGCG--ATCGAGGCAAGATTG 23038 |||| || ||| | | || | | | | | | | | | ||| || |||||||| || Sbjct 256501 AGTCA-AATCGCTCATTCTGGATATCGACATAGGTCGGCAGCGCAATAGAGGCAAGGTTA 256443 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || ||||| ||||| || | |||||||| | || ||||| || || ||| | Sbjct 256442 CAGACGGCAACCTCATCGGGAGCAGTGTACTCAATGATCTCGGTGCAGAGGTTGGAGCTG 256383 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || ||||| | || | |||||||| || || ||| | |||||||| |||||| Sbjct 256382 CGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTACGGTTGGCAGCGTCCTTGTAAAGCATG 256323 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 | || | || |||||| ||| | ||| | || || ||| || | || || | Sbjct 256322 AATGGGTTTCCAGTCTCGGTCTGGGCCTCTAGAATGGCATACCAGATCTTTTGGGCTCTA 256263 Query 23219 ACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277 || ||| | || | | || || |||||| | | ||| | | | |||||||| | Sbjct 256262 ACG-GTCTCGCGGCCGCGACCCTCACGCTCGTATCTCTCGTAAAGCTCTTCAAATTCATC 256204 Query 23278 ACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGT 23336 ||||| ||| || || || || || | | | || ||||||||| |||| | || Sbjct 256203 GCCGTAGACA-TCAGCGAGACCAGGGCACTCATTTGGGCACATGAGAGTCCAGGTGCCGT 256145 Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396 || || || || |||| || ||||| || ||||| || |||||||| || || |||| Sbjct 256144 TATCTTGGACACGCTTCATGAAGAGATCTGGAATCCAGAGGGCGTAGAAGAGGTCACGGG 256085 Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456 | || || || ||||| ||| |||||| | ||||| ||| |||| || ||||||| Sbjct 256084 CACGGACTTCTTCTTTTCCGTGGTTCTTACGGAGATCCAGGAAGGCCAAAACATCCGCAT 256025 Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516 |||| |||||||| || | |||||| || || || | || || || || || || || | Sbjct 256024 GCCATGGCTCGAGATATATGGCAAAGGCACCTGGGCGTTTGTTACCACCTTGGTCCACAT 255965 Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576 | | ||| ||||||||| |||| | ||||| ||||| ||||| ||||| | |||| | Sbjct 255964 ACCTGGCAGTGTTGTTGAACACGCGGAGCATGGGCACCAGACCATTGGAGGTGCCG-TTG 255906 Query 23577 CGCCCGCCACACT-CGAACCTTTTGCTC-GA-ACGTTGTGAACGTGGAAACCTATGCCTC 23633 |||| | | || || |||||| || ||| ||| | | | ||| || || | Sbjct 255905 GTACCGCTAATGTAGGAGCCAGTTGCTCTGATACG--GTGGGCATTCAGACCGATTCCAC 255848 Query 23634 CGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGT 23693 | | || || ||||| || || ||||| ||||||||||| || || ||||||| Sbjct 255847 CAGCGTTCTTGGAGATCATGGCACACGTCTTCAGTGTGTCGTAGATACCATCAATGCTGT 255788 Query 23694 CCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGA 23753 | || || | ||| | ||| ||||| | | || |||| || ||| | || || Sbjct 255787 CATCCTTCATATCGATGAGGAAGCACGAGGCAAGCTGGGCTTGTGGGGTACCAGCACTGA 255728 Query 23754 ACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGG 23813 | || || || |||||| || ||||| || ||||| | |||||||| || || | Sbjct 255727 AGAGGGTTGGAGAGGCGTGTGTGAAGTACTTGTTGGACATCAAGTTGTACGTCTCAATTG 255668 Query 23814 CGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGT 23864 | ||||||||||| ||||| ||||| | || || ||||| ||||||| Sbjct 255667 CACTCTCAATGTCCTCGCCGTGAATACCCACAGCAACACGCATGATCATGT 255617 >seq497 Length=111328 Score = 192 bits (212), Expect = 5e-44 Identities = 501/752 (67%), Gaps = 19/752 (3%) Strand=Plus/Minus Query 57562 ATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAG 57621 || || | || ||| | |||||||| |||||||| || || || ||||||| ||| || Sbjct 105330 ATTCATAGATCTGGCAGATGTACAAGAAGGCAGAGGCCTCTTTCTGGACCGCCGAGGAGA 105271 Query 57622 TAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATT 57678 | || ||||| |||||||| ||| ||| | | |||| || ||| | || Sbjct 105270 TCGATCTGTCCAAGGATCTTCACGACTGGAACAAGCGTCTCAATGACGACGAGCGCTTTT 105211 Query 57679 TTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGG 57738 | || ||||| | || || ||||| || |||||||| || || |||||||| | | Sbjct 105210 TCATCTCCCACGTTCTCGCCTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTTG 105151 Query 57739 TCGAAAGATTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCA 57796 |||| | ||||| | | ||||| | | ||||| || ||||| |||||||| || Sbjct 105150 TCGAGCG--TTTCAGTGGTGAGGTGCAGATCCCAGAGGCCAGGTGCTTCTACGGATTCCA 105093 Query 57797 AGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAA 57856 | || || ||| | || || |||| || || || |||||||| || ||| | | Sbjct 105092 GATCATGATGGAGAACATCCACTCGGAAACATACTCTCTCCTCATCGACACCTACATCAG 105033 Query 57857 GGACAACGACGAGAA-ACGTAGACTGTTCAACGCGATCGA-AACAATGCCCGCGATCGCC 57914 || | | ||| || || || |||||||| ||||| |||| | | || ||| | Sbjct 105032 TGAACCCAAGCAGAGGACCTAC-CTCTTCAACGCCATCGACAACATTCCTTGC-ATCCGC 104975 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCA---CGTTCGCCGAG 57971 |||||||| || ||| | | | ||||| | ||| || | || | |||||| Sbjct 104974 AAGAAGGCTGACTGGGCTTTGAGGTGGATCA---GCGACAAGAACAGCACATTCGCCTGC 104918 Query 57972 AGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATA 58031 ||||| || || ||||||||||| || ||||| ||||| || || ||||| | || Sbjct 104917 AGGCTTATTGCTTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGTTCATTTGCCTCCATC 104858 Query 58032 TTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCG 58091 || ||| | ||||| || ||||| ||| | || || || || ||||||| | || || Sbjct 104857 TTCTGGCTCAAGAAGCGTGGCCTCATGGCAGGTCTCACCTTCTCCAACGAGCTCATCTCC 104798 Query 58092 CGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAA 58151 || || ||||| | || || || || || ||||| | | ||||||| | | || Sbjct 104797 CGTGATGAGGGCATGCACACCGACTTCGCCTGCCTTCTTTTCTCTCACCTCAAGCACAAG 104738 Query 58152 CC-GACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 || ||| | | || || | ||| ||| |||||| ||||| || || | ||||| Sbjct 104737 CCTGAC-CAAGCTCTGGTCGAGTCCATCATCGTCGAGGCCGTCGCTATTGAGCAGGAGTT 104679 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 | || || ||||| || || ||||||||||||| | | |||| |||| Sbjct 104678 CCTTACTGACGCCCTGCCTTGTGCGTTGCTCGGTATGAATGCCAAGCTCATGTGCCAGTA 104619 Query 58271 CATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302 ||| ||||| ||||| ||| | || | |||| Sbjct 104618 CATCGAGTTCGTTGCAGACCGTCTCCTACTCG 104587 >seq246 Length=221927 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| || |||||| | || || || || Sbjct 103084 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTGGAGAGCTCA 103025 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | |||||||||||| | || || ||||| Sbjct 103024 GACACCATCGACAACGTCAAGTCAAAGA-TCCAAGACAAGGAAGGCATTCCCCCAGACCA 102966 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| |||||||| ||| | ||| || || || || Sbjct 102965 GCAGCGTCTCATTTTCGCAGGCAAGCAGTTGGAGGACGGCAGGACACTGTCAGACTACAA 102906 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| || || || ||||| || |||| || ||||| Sbjct 102905 CATCCAGAAGGAGAGCACTCTCCACTTGGTGCTGAGACT 102867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763552667120