Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq13 98.7 2e-15 >seq13 Length=329804 Score = 98.7 bits (108), Expect = 2e-15 Identities = 177/256 (69%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| ||| ||||| |||||||||| || || | ||| || || || || ||||| Sbjct 255857 CCGATTCCACCAGCGTTCTTGGAGATCATGGCACACGTCTTCAGTGTGTCGTAGATACCA 255798 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904 |||||||| ||||| | | | | ||||||||||||| ||| |||| |||| || Sbjct 255797 TCAATGCTGTCATCCTTCATATCGATGAGGAAGCACGAGGCAAGCTGGGCTTGTG-GGGT 255739 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| | | || || || || || || || || || || | | ||||| | | || Sbjct 255738 ACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAGTACTTGTTGGACATCAAGTTGTA 255679 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || ||||| || | ||||| |||||||| || ||||| |||||||| ||||| Sbjct 255678 CGTCTCAATTGCACTCTCAATGTCCTCGCCGTGAATACCCACAGCAACACGCATGATCAT 255619 Query 95025 GTCCTGAGGGCGCTCA 95040 || ||| || || ||| Sbjct 255618 GTGCTGGGGACGTTCA 255603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577521008005