Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq497 118 1e-21 >seq497 Length=111328 Score = 118 bits (130), Expect = 1e-21 Identities = 339/515 (66%), Gaps = 6/515 (1%) Strand=Plus/Plus Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259 |||||||| || ||||| || | ||| ||||||||||| || ||||| || ||||| ||| Sbjct 104808 TCGTTGGAGAAGGTGAGACCTGCCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCA 104867 Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCT-CTCTC-CAT 36317 ||||| ||||| ||||| || || || || || || || |||||||| || | | || Sbjct 104868 AATGAACCAGAGAAGAAGATACCCTCAACGGCGGCGAAAGCAATAAGCCTGCAGGCGAAT 104927 Query 36318 AACCGGCAC-TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 36376 | | | |||| |||||| | |||||| || |||||||| | ||||| Sbjct 104928 GTGCTGTTCTTGTCGCTGATCCACCTCAAAGCCCAGTCAGCCTTCTTGCGGATGCAAGGA 104987 Query 36377 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 36436 || | || || || || ||||| ||| | | | || || | | || || || Sbjct 104988 ATGTTGTCGATGGCGTTGAAGAGGTAGGTCCTCTGCTTGGGTTCACTGATGTAGGTGTCG 105047 Query 36437 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 36496 || | ||| || ||||||| || ||||| || || || || ||||||||||| Sbjct 105048 ATGAGGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAG 105107 Query 36497 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 36556 || || ||||| | ||||| || || || || || || | | || || || || Sbjct 105108 CACCTGGCCTCTGGGATCTGCACCTCACCACTGAAACGCTCGACAAGGTTCTCGTTGACG 105167 Query 36557 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTG 36614 || || || ||| || || || || | || || || ||| | |||| | Sbjct 105168 ATGCCATCGGAGGCAGCGAAGAAGGCGAGAACGTGGGAGATGAAAAAGCGCTCGTCGTCA 105227 Query 36615 GTGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 36673 || | | || ||||| || | | ||| || || | ||| | || || | ||||| Sbjct 105228 TTGAGACGCTTGTTCCAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAG 105287 Query 36674 AATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708 || || ||||||||||| || ||||| | |||||| Sbjct 105288 AAAGAGGCCTCTGCCTTCTTGTACATCTGCCAGAT 105322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168595921240