Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq246 87.8 2e-12 >seq246 Length=221927 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| |||||| || || || ||| Sbjct 103572 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGTTGCTTTCCA 103631 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| ||||| ||||| || ||||| |||||||| ||||| ||| || ||| Sbjct 103632 GCAAAGATAAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTT 103691 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | | || | ||||| | || ||| ||||||| || | ||||||||||| Sbjct 103692 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 103744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060831391200