Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq13 154 2e-32 seq497 147 3e-30 >seq13 Length=329804 Score = 154 bits (170), Expect = 2e-32 Identities = 1186/1887 (63%), Gaps = 41/1887 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 |||||||| |||||||| || || | | ||||| || |||||||| || || || | Sbjct 257366 GTGAATTGGATGGGAGCCGAAGCTGCCATTGTACGAAGGTAGTACATGCCGGTCTTCAAG 257307 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 ||||| |||| ||| ||||||||| || || | ||| | || || || Sbjct 257306 CCGAGCTTCCAGCCGGTGAAATGCATGCTTGTGATCTTGCCCATGGTAGGCTCCTTCATG 257247 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || || |||| ||||| || || ||||| || || | ||| || ||||| | ||| Sbjct 257246 TGAATGTTCAGGGATTGCGACTGGTCAATGAAAGCACCACGGTCAGCGGCCATCTGGATG 257187 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || || | ||||| | ||| || || | | ||| | ||| ||||| | | Sbjct 257186 ATGGTACGCTGGCTGAGCTCCCACACAGTCTTGTACAATGCCTTGAGATCATCTGGGATG 257127 Query 78958 TTTGT-ATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | || | || | || |||||||| || || || | ||||| || | ||| || Sbjct 257126 TTGGGGATGCGTTGGACCGAGCCACCATCAGCGATGATTCGGTTCTTCATGTTGTCACTC 257067 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || || | ||| | | | | || || || || || ||||| || || || Sbjct 257066 CACAAACCACGTTCGACGAGATCCTTGAGTAGCCAGGGGTTGACAACTTGGAACTCACCC 257007 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | || | || | || || || || || |||||||| | |||| || |||| Sbjct 257006 GCAAGCACACGGCGCGAATAGATGTTGCTTGTGTATGGTTCGAAGCATTCGTTGAATCCC 256947 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | || || | || || || |||||||| || || || | | | || | | |||| Sbjct 256946 ATGATCTGGGAGGTCGAAGCAGTTGGCATTGGGGCAACGAGGAGAGAGTTACGCACACCG 256887 Query 79195 -TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253 | || | || || |||| || | |||||||||||||||||| ||| ||| Sbjct 256886 GTTTGCGCA-ATCTTCGCTTTGAGGGCAGCCCAATCCCAAAGATCAGTGGGGGTGACACC 256828 Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAG-CGTATGATCCTGTGTATGTTTCATAAG 79312 ||| | || ||||| || ||| || | || | ||| ||| ||| || || |||| Sbjct 256827 CCACATGTCGTATTGAAGCTCACCCTT-CGAGACAGGTGAGCCTTCGTAGGTCTCGTAAG 256769 Query 79313 GTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 | || |||||| || | || | | ||| || || ||| || || || |||| Sbjct 256768 GACCAAGCTTTTCAGCGAGATCGCTAGACGCGGTCAAAGCGGCGTGGTAGATAGTCTCGA 256709 Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTA-TCAAATGG-ATAATTTAAGAGAAT 79430 | || | | ||||| | ||||||| ||| | || ||||| || | || Sbjct 256708 AGATTTGGATGTTGAGCTGGCGTGCTTC-AGGAGAGTCGAATGGCATGCGCAGGGCGAGG 256650 Query 79431 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAAT 79490 ||| || ||||| || || | ||||||| ||| || || | || | || | | Sbjct 256649 AAA-GCATCTGCCAAACCATTGACACCAAGACCAATCGGACGGTGGCGGAAGTT-GCCCT 256592 Query 79491 TTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549 | | ||| || || | ||| || | || | || || || || || | || ||| | Sbjct 256591 TGCGAGCCTCAGGTACAGGGTATTTGTTGACCTCAATGATCTTGTTCAAGTTTCTGGTAA 256532 Query 79550 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TATT-ACAA 79603 || | | || || | || || || |||||||| ||| ||| ||| Sbjct 256531 CGACCTGGGTTACTTCGTGGAGCTTCTTGAAGTCAAATCGCTCATTCTGGATATCGACAT 256472 Query 79604 ACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 79663 | | || ||| | ||| || || ||||| ||||| ||||||| | | | | || | Sbjct 256471 AGGTCGGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGAGCAGTGTACT 256412 Query 79664 GTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCT 79723 || || || ||||||||||| | ||||| || | || | ||| || |||| Sbjct 256411 CAATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCTCT 256352 Query 79724 TTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTA 79783 | ||| || ||||| ||||| ||||| || | ||||| || |||| | |||| Sbjct 256351 TACGGTTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTCTGGGCCTCTA 256292 Query 79784 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTT---TCTCTTT 79840 ||| || | ||||| | | || | | | | || | | || | | Sbjct 256291 GAATGGCATACCAGATCTTTTGGGC---TCTAACGGTCTCGCGGCCGCGACCCTCACGCT 256235 Query 79841 CGTAT-TGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACA 79898 ||||| | | ||| | || ||| || || || || | ||||| | | ||||| || Sbjct 256234 CGTATCTCTCGTAAAGC-TC-TTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCA 256177 Query 79899 TTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATC 79958 || | || ||||| | | ||| || | ||| | || || ||||| |||||||| Sbjct 256176 CTCATTTGGGCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAGATC 256117 Query 79959 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTT 80018 |||||||| || || || || || | || | || || ||||| ||||| Sbjct 256116 TGGAATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTT 256057 Query 80019 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 80078 ||||| ||||| |||| || ||| | |||||| || || | |||||||| | | Sbjct 256056 ACGGAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGC 255997 Query 80079 TCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 80138 || || |||||||| || || || || | || || || ||||| || | || | | Sbjct 255996 ACCTGGGCGTTTGTTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACGCGGAG 255937 Query 80139 CATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 80198 ||| || | | ||||||||| || || ||||| ||| || ||| ||| | || | Sbjct 255936 CATGGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTTGCTCT 255877 Query 80199 AATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 80256 ||| | ||| | |||| ||||| || || | || ||||| | || || ||| Sbjct 255876 GATACGGTGGGCATTCA--GACCGATTCCACCAGCGTTCTTGGAGATCATGGCACA-CGT 255820 Query 80257 TTTAAC-GTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315 || | || || ||||| || || ||||| ||||| |||| | | || || || | Sbjct 255819 CTTCAGTGTGTCGTAGATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGCA-CG 255761 Query 80316 AGACATT-TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 80374 || || ||| | || || ||| | || | ||| ||||| ||||| || || Sbjct 255760 AGGCAAGCTGGGCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAGT 255701 Query 80375 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTC 80434 | || | |||| | |||||||||||||| || || || ||| ||||| | Sbjct 255700 ACTTGTTGGACATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCGTGAATAC 255641 Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 80494 | || || |||||||| | ||||||||| || | |||| ||| ||| || || || Sbjct 255640 CCACAGCAACACGCATGATCATGTGCTGGGGACGTTCAGCGACCTTTCCATCGATACGCA 255581 Query 80495 ACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 80552 | ||| || | |||| || |||||||| || || | ||| ||||| || || || Sbjct 255580 GGAGGTAGGACCTCTCCAGTGTCTTAAAACCGAAGTATTGGTAGTTGAAA--TCACGGTC 255523 Query 80553 GTAAATAATAACCGAGTTGAGTTTATC 80579 ||| | |||| | || ||||| | ||| Sbjct 255522 GTAGACAATAGCTGAATTGAGCTCATC 255496 >seq497 Length=111328 Score = 147 bits (162), Expect = 3e-30 Identities = 370/560 (66%), Gaps = 12/560 (2%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||||| ||||| || | || || |||||||| || ||||| Sbjct 104766 CAGGCGAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGA 104825 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || | ||| ||||||||||| || ||||| || ||||| |||||||| ||||| |||||| Sbjct 104826 CCTGCCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAATGAACCAGAGAAGAAG 104885 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG-TCATGT-- 50136 || || || || ||||| || |||| ||| || | | | |||| || ||| Sbjct 104886 ATACCCTCAACGGCGGCGAAAGCAATAAGCCTGCAGGCGAA---TGTGCTGTTCTTGTCG 104942 Query 50137 ---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 50193 |||||| | |||||| || |||||||| | ||||| || | || ||||| Sbjct 104943 CTGATCCACCTCAAAGCCCAGTCAGCCTTCTTGCGGATGCAAGGAATGTTGTCGATGGCG 105002 Query 50194 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 || ||||| ||| | | | || || | | || || ||||| | ||| || Sbjct 105003 TTGAAGAGGTAGGTCCTCTGCTTGGGTTCACTGATGTAGGTGTCGATGAGGAGAGAGTAT 105062 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 ||||||| || ||||| || || ||||| ||||||||||| || || ||||| | Sbjct 105063 GTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACCTGGCCTCTGGG 105122 Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 |||||||| || || || || || | | || || || || || || || ||| Sbjct 105123 ATCTGCACCTCACCACTGAAACGCTCGACAAGGTTCTCGTTGACGATGCCATCGGAGGCA 105182 Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTC 50430 || || || || | || || || ||| |||| | | | | || ||| Sbjct 105183 GCGAAGAAGGCGAGAACGTGGGAGATGAAAAAGCGCTCGTCGTCATTGAGACGCTTGTTC 105242 Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490 || || | | ||| || || | ||| | || || | ||||| || || ||||||||| Sbjct 105243 CAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAGGCCTCTGCC 105302 Query 50491 TTTTTATACATATTCCAGAT 50510 || || ||||| | |||||| Sbjct 105303 TTCTTGTACATCTGCCAGAT 105322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264212058040