Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq497 284 2e-71 seq13 134 2e-26 >seq497 Length=111328 Score = 284 bits (314), Expect = 2e-71 Identities = 584/855 (68%), Gaps = 15/855 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||| | ||| ||| |||||||| Sbjct 105322 ATCTGGCAGATGTACAAGAAGGCAGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 105263 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | ||| | | ||| ||||| || || || Sbjct 105262 TCCAAGGATCTTCACGACTGGAACAAGCGTCTCAATGACGACGAGCGCTTTTTCATCTCC 105203 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| || | |||||||| || | ||||||||| ||||||||||| || || || || || Sbjct 105202 CACGTTCTCGCCTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTTGTCGAG-CG 105144 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| | ||| || || ||||||| |||||| ||||||||||| |||||||| Sbjct 105143 TTTCAGTGGTGAGGTGCAGATCCCAGAGGCCAGGTGCTTCTACGGATTCCAGATCATGAT 105084 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCA 125317 |||||| | |||||||||| |||||| || || |||| ||||| | || || || Sbjct 105083 GGAGAACATCCACTCGGAAACATACTCTCTCCTCATCGACACCTACATCAGTGAACC-CA 105025 Query 125318 ACGTAAACACATGC-TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTC 125376 | | || | | |||| ||||| ||||||| | || | || || || |||||| Sbjct 105024 AGCAGAGGACCTACCTCTTCAACGCCATCGACAACATTCCTTGCATCCGCAAGAAGGCTG 104965 Query 125377 AATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCAT 125436 | |||| | |||||||| ||| | || | | |||| ||| || | || | Sbjct 104964 ACTGGGCTTTGAGGTGGATCAGCGACAAGAACAGCACATTCGCCTGCAGGCTTATTGCTT 104905 Query 125437 TCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGA 125496 |||||||||| ||||| |||||||| || ||| ||||| ||||||| |||||||||| Sbjct 104904 TCGCCGCCGTTGAGGGTATCTTCTTCTCTGGTTCATTTGCCTCCATCTTCTGGCTCAAGA 104845 Query 125497 AGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCC 125556 |||| || |||||| | || || || | |||||| | || || || || |||||| Sbjct 104844 AGCGTGGCCTCATGGCAGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGCA 104785 Query 125557 TACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCA 125616 | ||| ||||| ||| || || |||| | | || | | || | || | | Sbjct 104784 TGCACACCGACTTCGCCTGCCTTCT-TTTCTC--TCACCTCAAGCACAAG-CCTGACCAA 104729 Query 125617 GCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAA 125676 || || ||| || ||| || ||| ||||| || || || ||||| || | Sbjct 104728 GCTCTGGTCGAGTC--CATCATCGT---CGAGGCCGTCGCTATTGAGCAGGAGTTCCTTA 104674 Query 125677 CCGAATCCCTACC-GGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATA 125735 | || |||| || || | || | || ||||| |||||| |||||| ||||||| Sbjct 104673 CTGACGCCCTGCCTTGTGCG-TTGCTCGGTATGAATGCCAAGCTCATGTGCCAGTACATC 104615 Query 125736 GAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCAAG 125795 ||||| || ||||| ||||| || || | | ||||| ||| | |||| Sbjct 104614 GAGTTCGTTGCAGACCGTCTCCTACTCGCCCTCGGCAACAGCAAGCACTACCATGCCACT 104555 Query 125796 AATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 || ||||| || |||||| | ||| || || | || ||||||||||| || |||||| Sbjct 104554 AACCCCTTCGACTTCATGGAGAACATTTCCCTCGCTGGCAAGACCAACTTCTTTGAGAAG 104495 Query 125856 AAGGTCAGCGAGTAC 125870 | ||| | || ||| Sbjct 104494 AGAGTCGGTGACTAC 104480 >seq13 Length=329804 Score = 134 bits (148), Expect = 2e-26 Identities = 351/530 (66%), Gaps = 4/530 (1%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||||| | ||| ||| || ||||| |||||| | ||| ||| || || || | Sbjct 255904 ACCAACGGCACCTCCAATGGTCTGGTGCCCATGCTCCGCGTGTTCAACAACACTGCCAGG 255963 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 || || || || || || ||||| ||||| || | ||| | || | || || || Sbjct 255964 -TATGTGGACCAAGGTGGTAACAAACGCCCAGGTGCCTTTGCCATATATCTCGAGCCATG 256022 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 ||| ||||| ||||| | ||| | || | || || ||| || ||||| | || Sbjct 256023 GCATGCGGATGTTTTGGCCTTCCTGGATCTCCGTAAGAACCACGGAAAAGAAGAAGTCCG 256082 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 ||| | ||| | || || || |||||| | |||||| | ||||||||||| ||| | || Sbjct 256083 TGCCCGTGACCTCTTCTACGCCCTCTGGATTCCAGATCTCTTCATGAAGCGTGTCCAAGA 256142 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 ||| ||||| || |||||||| | || || ||||| | ||| || || Sbjct 256143 TAACGGCACCTGGACTCTCATGTGCCCAAATGAGTGCCCTGGTCTCGCTGATGTCTACGG 256202 Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAG 97164 ||| || ||||| | ||| | ||||||| ||||| || || ||||| Sbjct 256203 CGATGAATTTGAAGAGCTTTACGAGAGATACGAGCGTGAGGGTCGCGGCCGCGAGACCGT 256262 Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | || || | | | | ||| | ||||| | ||| ||| |||||||||| || | Sbjct 256263 TAGA-GCCCAAAAGATCTGGTATGCCATTCTAGAGGCCCAGACCGAGACTGGAAACCCAT 256321 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284 ||| || |||||||| | | || || || ||||||||| || | ||||||||| Sbjct 256322 TCATGCTTTACAAGGACGCTGCCAACCGTAAGAGCAACCAAAAGAACCTCGGCACCATCC 256381 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||||||| || ||||| || || | |||||| | |||| || ||| Sbjct 256382 GCAGCTCCAACCTCTGCACCGAGATCATTGAGTACACTGCTCCCGATGAG 256431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054466484360