Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq246 105 2e-17 >seq246 Length=221927 Score = 105 bits (116), Expect = 2e-17 Identities = 139/190 (73%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || ||||| || || || | ||||| Sbjct 103556 AAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTC 103615 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| ||||| ||||||||||| || || | ||| || || ||||| || ||||| || || Sbjct 103616 TTCAAGTTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 103675 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAG 104525 ||| ||||| | ||||| || || | ||| || | ||| || ||||| || || || | Sbjct 103676 CTGGATCTTGGACTTTACGTTGTCGATGGTGTC-CGAGGACTCGACCTCAAGAGTGATGG 103734 Query 104526 TCTTACCAGT 104535 |||| || || Sbjct 103735 TCTTGCCGGT 103744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151390861578788