Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq246 104 2e-17 >seq246 Length=221927 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || || | ||||| ||||| ||||| ||||| || || ||||| ||| Sbjct 103158 TCCTCCAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATGCCTTCCTTG 103217 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || |||| ||||||| | ||| ||||| | | || || || | |||||| Sbjct 103218 TCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCTGAGCTCTCCACTTCCAGGGTGATG 103277 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || || || || ||||||||||| Sbjct 103278 GTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 103312 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TG 94849 || || ||||||||| | ||| ||||| || | ||| || || | | ||||| || Sbjct 102869 TCTCAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC--TGACAGTGTCCTG 102926 Query 94850 GAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 ||||||| ||| || || | || || | | ||||| ||||| ||||| ||||| Sbjct 102927 CCGTCCTCCAACTGCTTGCCTGCGAAAATGAGACGCTGCTGGTCTGGGGGAATGCCTTCC 102986 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 ||||| | || |||| ||||||| | ||| ||||| | | || || || | ||| Sbjct 102987 TTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCTGAGCTCTCCACTTCCAGGGTG 103046 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || ||||| || || ||||||||||| Sbjct 103047 ATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 103084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288336539960