Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq13 407 4e-108 >seq13 Length=329804 Score = 407 bits (450), Expect = 4e-108 Identities = 1168/1782 (66%), Gaps = 26/1782 (1%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | |||||| |||||| |||||||| |||||| |||| | | | |||| Sbjct 255547 TTCGGTTTTAAGACACTGGAGAGGTCCTACCTCCTGCGTATCGATGGAAAGGTCGCTGAA 255606 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||| ||| | |||||||||||| | ||||| || || ||| |||| Sbjct 255607 CGTCCCCAGCACATGATCATGCGTGTTGCTGTGGGTATTCACGGCGAGGACATTGAGAGT 255666 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAA 363568 || ||||| || || || ||| | || | | ||| ||||| |||||| | ||||| Sbjct 255667 GCAATTGAGACGTACAA-CTTG-ATGTCCAACAAGTACTTCACACACGCCTCTCCAACCC 255724 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | || |||||| || | | | ||| | | || ||||| || | | ||||||| Sbjct 255725 TCTTCAGTGCTGGTACCCCACAAGCCCAGCTTGCCTCGTGCTTCCTCATCGATATGAAGG 255784 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || ||| || ||||||| |||||||| |||| ||||| | || |||||||| | Sbjct 255785 ATGACAGCATTGATGGTATCTACGACACACTGAAGACGTGTGCCATGATCTCCAAGAACG 255844 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCA 363748 | || ||||| ||| | |||| | | | ||| | |||||| |||| | Sbjct 255845 CTGGTGGAATCGGTCTGAATGCCCACCGTATCAGAGCAACTGGCTCCTACATTAGCGGTA 255904 Query 363749 CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 | || ||| ||||| ||||| |||||||| || ||||| |||| ||||| |||| Sbjct 255905 CCAACGGCACCTCCAATGGTCTGGTGCCCATGCTCCGCGTGTTCAACAACACTGCCAGGT 255964 Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868 | || ||||| ||||| || ||| ||| || ||||| || ||||||||||| | Sbjct 255965 ATGTGGACCAAGGTGGTAACAAACGCCCAGGTGCCTTTGCCATATATCTCGAGCCATGGC 256024 Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928 |||| ||| |||| | || || || ||||| || ||| |||||||| ||| | |||| Sbjct 256025 ATGCGGATGTTTTGGCCTTCCTGGATCTCCGTAAGAACCACGGAAAAGAAGAAGTCCGTG 256084 Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAG 363988 | ||||| || ||||| || || ||| || | || | || |||||||| || | || Sbjct 256085 CCCGTGACCTCTTCTACGCCCTCTGGATTCCAGATCTCTTCATGAAGCGTGTCCA---AG 256141 Query 363989 GTAA---GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 ||| | ||| | ||| | |||||| | || || || ||||| | ||||| | | Sbjct 256142 ATAACGGCACCTGGACTCTCATGTGCCCAAATGAGTGCCCTGGTCTCGCTGATGTCTACG 256201 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 | || || | || | || ||||| | || || ||||| | || |||| Sbjct 256202 GCGATGAATTTGAAGAGCTTTACGAGAGATACGAGCGTGAGGGTCGCGGCCGCGAGACCG 256261 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 || || || ||| | |||| |||||| | || | |||| ||||| |||| || | Sbjct 256262 TTAGAGCCCAAAAGATCTGGTATGCCATTCTAGAGGCCCAGACCGAGACTGGAAACCCAT 256321 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 ||| | ||||| || | |||||| ||| |||||| || |||| || || | || Sbjct 256322 TCATGCTTTACAAGGACGCTGCCAACCGTAAGAGCAACCAAAAGAACCTCGGCACCA-TC 256380 Query 364226 AGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 |||| |||||| || |||||||| ||||| ||||| |||||||| ||| |||||| Sbjct 256381 CGCAGCTCCAACCTCTGCACCGAGATCATTGAGTACACTGCTCCCGATGAGGTTGCCGTC 256440 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AG-ATGGTACTTTTGAC 364338 ||||||||||| || || ||||| ||| | | ||| | || ||| |||||| Sbjct 256441 TGTAACCTTGCCTCTATTGCGCTGCCGACCTATGTCGATATCCAGAATGAGCGATTTGAC 256500 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398 | || | || | || |||||| | | ||| | || | ||||| | || || Sbjct 256501 TTCAAGAAGCTCCACGAAGTAACCCAGGTCGTTACCAGAAACTTGAACAAGATCATTGAG 256560 Query 364399 AAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGATTGG 364457 || | || || | ||||| || || | | || | || || || |||||||| Sbjct 256561 GTCAACAAATACCCTGTACCTGAGGCTCGCAAGGGC-AACTTCCGCCACCGTCCGATTGG 256619 Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCC 364517 ||||||||| | || | || || | ||| | || ||| |||| || || || Sbjct 256620 TCTTGGTGTCAATGGTTTGGCAGATGCTTTCCTCGCCCTGCGCATGCCATTCGACTCTCC 256679 Query 364518 TGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGC 364577 ||| || || || || | | ||||| || || || || ||||| |||| || Sbjct 256680 TGAAGCACGCCAGCTCAACATCCAAATCTTCGAGACTATCTACCACGCCGCTTTGACCGC 256739 Query 364578 TTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTC 364637 || | ||| | || ||| || ||| || || || || || ||| | || Sbjct 256740 GTCTAGCGATCTCGCTGAAAAGCTTGGTCCTTACGAGACCTACGAAGGCTCACCTGTCTC 256799 Query 364638 GCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGA 364697 | |||| | | || | || | ||| |||||| || ||| | ||| | |||| Sbjct 256800 GAAGGGTGAGCTTCAATACGACATGTGGGGTGTCACCCCCACTGATCTTTGGGATTGGGC 256859 Query 364698 TACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTCGTTACAGCGCC 364754 | | || | || || | | ||| || ||||| ||||||| || || Sbjct 256860 TGCCCTCAAAGCGAAGATTGCGCAAACCGGTGTGCGTAACTCTCTCCTCGTT---GCCCC 256916 Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814 ||||| || ||||| || | |||||| | ||| |||||| ||||||||||| | || Sbjct 256917 AATGCCAACTGCTTCGACCTCCCAGATCATGGGATTCAACGAATGCTTCGAACCATACAC 256976 Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874 |||||| | ||||| ||||| || ||| | || || || | || || || | || Sbjct 256977 AAGCAACATCTATTCGCGCCGTGTGCTTGCGGGTGAGTTCCAAGTTGTCAACCCCTGGCT 257036 Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934 | |||||||||| ||| || || ||||| |||||| |||||||||| |||||||| Sbjct 257037 ACTCAAGGATCTCGTCGAACGTGGTTTGTGGAGTGACAACATGAAGAACCGAATCATCGC 257096 Query 364935 CGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAA 364994 | | ||| || || || ||| || | ||||| ||||| ||| | | ||||| Sbjct 257097 TGATGGTGGCTCGGTCCAACGCATCCCCAACATCCCAGATGATCTCAAGGCATTGTACAA 257156 Query 364995 AACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTT 365054 || || ||||| | | ||| || |||| | ||||| || || || |||||||| Sbjct 257157 GACTGTGTGGGAGCTCAGCCAGCGTACCATCATCCAGATGGCCGCTGACCGTGGTGCTTT 257216 Query 365055 TATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114 || ||| || || | ||| | ||||| |||| ||| | |||| | || Sbjct 257217 CATTGACCAGTCGCAATCCCTGAACATTCACATGAAGGAGCCTACCATGGGCAAGATCAC 257276 Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||||||||| ||| ||||| ||| | ||||| || Sbjct 257277 AAGCATGCATTTCACCGGCTGGAAGCTCGGCTTGAAGACCGG 257318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345066699602