Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq497 125 9e-24 >seq497 Length=111328 Score = 125 bits (138), Expect = 9e-24 Identities = 340/518 (66%), Gaps = 12/518 (2%) Strand=Plus/Plus Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762 |||||||| || ||||| || | ||| ||||||||||| || ||||| || ||||| ||| Sbjct 104808 TCGTTGGAGAAGGTGAGACCTGCCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCA 104867 Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 32822 ||||| ||||| ||||| || || || || || || || |||||||| || | | Sbjct 104868 AATGAACCAGAGAAGAAGATACCCTCAACGGCGGCGAAAGCAATAAGCCTGCAGGCGAA- 104926 Query 32823 CCGGCGCTG-TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA 32876 | |||| || ||| |||||| | |||||| || |||||||| | ||| Sbjct 104927 --TGTGCTGTTCTTGTCGCTGATCCACCTCAAAGCCCAGTCAGCCTTCTTGCGGATGCAA 104984 Query 32877 GGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTA 32936 || || | || || || || ||||| ||| | | | || || | | || || Sbjct 104985 GGAATGTTGTCGATGGCGTTGAAGAGGTAGGTCCTCTGCTTGGGTTCACTGATGTAGGTG 105044 Query 32937 TCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAG 32996 || || | ||| || ||||||| || ||||| || || || || ||||||||| Sbjct 105045 TCGATGAGGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAG 105104 Query 32997 AAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTC 33056 ||||| || ||||| | ||||| || || || || || || | | || || || Sbjct 105105 AAGCACCTGGCCTCTGGGATCTGCACCTCACCACTGAAACGCTCGACAAGGTTCTCGTTG 105164 Query 33057 ACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCT 33116 || || || || ||| || || || || | || || || ||| | ||||| Sbjct 105165 ACGATGCCATCGGAGGCAGCGAAGAAGGCGAGAACGTGGGAGATGAAAAAGCGCTCGTCG 105224 Query 33117 GGTGTTA---GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 33173 | | | || ||||| || | | ||| || || | ||| | || || | ||| Sbjct 105225 TCATTGAGACGCTTGTTCCAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTC 105284 Query 33174 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 || || || ||||||||||| || ||||| | |||||| Sbjct 105285 CAGAAAGAGGCCTCTGCCTTCTTGTACATCTGCCAGAT 105322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627952675600