Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq497 183 3e-41 >seq497 Length=111328 Score = 183 bits (202), Expect = 3e-41 Identities = 380/560 (68%), Gaps = 7/560 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | || || || || || || | ||| ||| ||| || | Sbjct 104765 GCAGGCGAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAG 104824 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||||| | || || || ||||||||||| || || || ||||| |||||| || || Sbjct 104825 ACCTGCCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAATGAACCAGAGAAGAA 104884 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT-GC 93269 ||||| || ||||| || || || | || | ||| || | ||| | | | || Sbjct 104885 GATACCCTCAACGGCGGCGAAAGCAATAAGCCTGCAGGCGAA-TGTGCTGTTCTTGTCGC 104943 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCG 93328 ||||||| | |||||||| || || || || || ||||| | |||| ||||| ||| Sbjct 104944 TGATCCACCTCAAAGCCCAGTCAGCCTTCTTGCGGATGCAAGGAA-TGTTGTCGATGGCG 105002 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || || ||||| | || | | || | ||||| || ||||| | ||||| || Sbjct 105003 TTGAAGAGGTAGGTCCTCTGCTTGGGTTCACTGATGTAGGTGTCGATGAGGAGAGAGTAT 105062 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 |||| || |||| |||||||| || |||||||||||||| || || || || | | Sbjct 105063 GTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACCTGGCCTCTGGG 105122 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 |||||||| || | || | ||| || || || || ||||| || |||||||| || Sbjct 105123 ATCTGCACCTCACCACTGAAACGCTCGACAAGGTTCTCGTTGACGATGCCATCGGAGGCA 105182 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCC 93565 || || || || | | || || ||| ||| || || || | |||| | | Sbjct 105183 GCGAAGAAGGCGAGAACGTGGGAGATGAAAAAGCGCTCGTCGTCATTGAGACGCTTGTTC 105242 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || ||| ||||| || || ||||||| || ||| | ||||| || || || ||||| Sbjct 105243 CAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAGGCCTCTGCC 105302 Query 93626 TTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 105303 TTCTTGTACATCTGCCAGAT 105322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857243051640