Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq246 93.3 4e-14 >seq246 Length=221927 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || || || || || |||||||| ||| Sbjct 103539 ATACCACCACGAAGACGAAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 103598 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||||| || ||||| |||| |||||||| ||||| ||| Sbjct 103599 GAAAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGA 103658 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| |||| | || | |||||| | ||| ||| Sbjct 103659 GGAATGCCTTCCTTGTCCTGGATCTTGGACTTTACGTTGTCGATGGTGTCCGAGGACTCG 103718 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | || | || |||||||| Sbjct 103719 ACCTCAAGAGTGATGGTCTTGCCGGT 103744 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| ||||||| || || || | || || || || |||||||| || | Sbjct 102858 CCACCACGAAGTCTCAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGAC 102917 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || | || || | || || || ||| | ||||||||||| ||||| || ||| Sbjct 102918 AGTGTCCTGCCGTCCTCCAACTGCTTGCCTGCGAAAATGAGACGCTGCTGGTCTGGGGGA 102977 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 |||||||| ||||| |||||| || | | || | |||||| | | || || Sbjct 102978 ATGCCTTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCTGAGCTCTCCACT 103037 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| ||| | || |||||||||||||| || || || |||||||| Sbjct 103038 TCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 103084 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || |||||||||||||| || ||||| || || || || ||||||||| || Sbjct 103122 TCCTTCTGAATGTTGTAATCCGACAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAG 103181 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || | | ||| ||||| || || |||||||| ||||| |||||| || | | Sbjct 103182 ATCAATCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATCTTTGACTTGACGTTG 103241 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||| | | || || |||| ||| | || || ||||| || || || || Sbjct 103242 TCGATGGTGTCTGAGCTCTCCACTTCCAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACG 103301 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 103302 AAGATCTGCAT 103312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131783481732