Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq35 87.8 1e-12 seq246 82.4 6e-11 >seq35 Length=320448 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||| ||||| ||||| |||||||||||||| |||||||| || | Sbjct 216282 ACCACCACGCAGGCGCAGGACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 216223 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| || | ||||||||||| || |||| ||||||||| ||| || Sbjct 216222 GAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 216163 Query 34020 CACGCTCTCTTTGTCC 34035 | | ||| |||||| Sbjct 216162 GATACCCTCCTTGTCC 216147 >seq246 Length=221927 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 33915 CAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTC--GCTCG 33972 |||||||| || || |||||||||||||| |||||||| |||| | | |||| || || Sbjct 102872 CAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGAC-AGTGTCCTGC-CG 102929 Query 33973 TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || ||||| |||||||| || || || || |||||||| || Sbjct 102930 TCCTCCAACTGCTTGCCTGCGAAAATGAGACGCTGCTGGTC 102970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397059927169822