Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq13 214 2e-50 seq497 102 1e-16 >seq13 Length=329804 Score = 214 bits (236), Expect = 2e-50 Identities = 656/1005 (65%), Gaps = 17/1005 (2%) Strand=Plus/Minus Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448 ||| |||| || |||| || | ||| || ||||| | | | ||||| | | ||| Sbjct 256541 TTTCTGGTAACGACCTGGGTTACTTCGTGGAGCTTCTTGAAGTCAAATCGCTCATTCTGG 256482 Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 || |||||| | || || || || || || || ||||| || | |||||| | Sbjct 256481 ATATCGACATAGGTCGGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGA 256422 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 |||||||||| || || || || || | || || || |||||||| | ||||||| Sbjct 256421 GCAGTGTACTCAATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTT 256362 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || ||| ||| || ||||||||||||||| |||| | || ||||| || Sbjct 256361 TGGTTGCTCTTACGGTTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTC 256302 Query 114629 TGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 114688 |||| || ||||| || | ||||| | |||| || || || | | || ||| Sbjct 256301 TGGGCCTCTAGAATGGCATACCAGATCTTTTGGGCTCTAACGGTCTCGCGGCCGCGACCC 256242 Query 114689 TCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 114748 || |||||| | ||| || ||||||| || || || | | || | ||| || Sbjct 256241 TCACGCTCGTATCTCTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCA 256182 Query 114749 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAG 114808 || || || |||||| | ||||| ||| || || | ||||||||||||||| Sbjct 256181 GGGCACTCATTTGGGCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAG 256122 Query 114809 AGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 114868 || ||||| |||||||| || ||||||| || || || ||||||| | || || Sbjct 256121 AGATCTGGAATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGG 256062 Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928 || ||| | |||| ||| ||| | |||||| ||||| || || || || | || Sbjct 256061 TTCTTACGGAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGC- 256003 Query 114929 ATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 | | | ||| | || |||| | |||| |||||||| || ||| || || Sbjct 256002 AAAGGCACCT--GGGCGTTTGTTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAAC 255945 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACT 115040 ||||| ||||| || | | ||||| || ||| || || || | || || ||| | Sbjct 255944 ACGCGGAGCATGGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCC- 255886 Query 115041 TATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 115100 | | ||||||| | ||| | || ||| || || || || ||| ||||| | Sbjct 255885 -AGTTGCTCTGATACGGTGGGCATTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGG 255827 Query 115101 CGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGA 115160 | ||| | | || || ||||||| || || || |||| |||| | |||| |||| Sbjct 255826 CACACGTCTTCAGTGTGTCGTAGATACCATCAATGCTGTCATCCTTCATATCGATGAGGA 255767 Query 115161 AGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 |||| | | || ||| | ||| |||||||| ||||||||||||| | ||||| Sbjct 255766 AGCA-CGAGGCAAGCTGGGCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGT 255708 Query 115220 ATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCC 115278 |||| ||| | | ||||||| | ||| ||||| | | |||||| || || Sbjct 255707 GTGAA-GTACTTGTTGGACATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCC 255649 Query 115279 GTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATC 115338 ||||||||| | | || ||||| | ||||| ||||| ||| | | ||||| Sbjct 255648 GTGAATACCCACAGCAACACGCATGATCATGTGCTGGGGACGTTCAGCGACCTTTCCATC 255589 Query 115339 GAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 || | | ||||||| | |||||| ||||| | ||| || || Sbjct 255588 GATACGCAGGAGGTAGGACCTCTCCAGTGTCTTAAAACCGAAGTA 255544 >seq497 Length=111328 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||| |||||||||||||| || || |||||| || |||| |||||| || |||||| Sbjct 104787 CCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCTGCCATGAGGCCACGCTTC 104846 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | ||||||||| ||||||||||| ||||| || ||||| Sbjct 104847 TTGAGCCAGAAGATGGAGGCAAATGAACCAGAGAAGAAGATACCCTCAACGGCGGCGAAA 104906 Query 126185 GCAA 126188 |||| Sbjct 104907 GCAA 104910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349784403880