Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq13 228 8e-55 >seq13 Length=329804 Score = 228 bits (252), Expect = 8e-55 Identities = 614/931 (66%), Gaps = 16/931 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | || || || ||||||| ||| |||||||| || ||||| Sbjct 255535 AACTACCAATACTTCGGTTTTAAGACACTGGAGAGGTCCTACCTCCTGCGTATCGATGGA 255594 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | || || || || || || | ||||| || || | || ||||||||| | Sbjct 255595 AAGGTCGCTGAACGTCCCCAGCACATGATCATGCGTGTTGCTGTGGGTATTCACGGCGAG 255654 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891 ||||| || || | | | | || || || | ||| | ||| || Sbjct 255655 GACATTGAGAGTGCAATTGAGACGTACA---ACTTGATGTCCAACAAGTACTTCACACAC 255711 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || ||||| |||| || || ||||| | ||| | | ||||| ||||| Sbjct 255712 GCCTCTCCAACCCTCTTCAGTGCTGGTACCCCACAAGCCCAGCTTGCCTCGTGCTTCCTC 255771 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | |||| ||| ||| || || | ||||| || ||| ||||| | Sbjct 255772 ATCGATATGAAGGATGACAGCATTGATGGTATCTACGACACACTGAAGACGTGTGCCATG 255831 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTAC--GTGCCAGGGGTT 94069 ||||| || |||| || |||||||| | | || |||| |||| | || | || | Sbjct 255832 ATCTCCAAGAACGCTGGTGGAATCGGTCTGAATGCCCAC--CGTATCAGAGCAACTGGCT 255889 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 ||||||| |||||||||| ||||||||||| || || || || |||||||| || |||| Sbjct 255890 CCTACATTAGCGGTACCAACGGCACCTCCAATGGTCTGGTGCCCATGCTCCGCGTGTTCA 255949 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| | || | || |||||||| |||||| | | ||| | || || | | Sbjct 255950 ACAACACTGCCAGGTATGTGGACCAAGGTGGTAACAAACGCCCAGGTGCCTTTGCCATAT 256009 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 |||||||||| ||||| ||||| || ||| ||| | || || || ||||||||||| | Sbjct 256010 ATCTCGAGCCATGGCATGCGGATGTTTTGGCCTTCCTGGATCTCCGTAAGAACCACGGAA 256069 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || | | ||| | |||||||||||||| |||||| | ||||| || || |||| Sbjct 256070 AAGAAGAAGTCCGTGCCCGTGACCTCTTCTACGCCCTCTGGATTCCAGATCTCTTCATGA 256129 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || ||| | | ||| | |||||| ||| | || || ||||| || || || || Sbjct 256130 AGCGTGTCCAAGATAACGGCACCTGGACTCTCATGTGCCCAAATGAGTGCCCTGGTCTCG 256189 Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAG 94428 | || || | || |||||||| | || | | ||||| |||| | | Sbjct 256190 CTGATGTCTACGGCGATGAATTTGAAGAGCTTTACGAGAGATACGAGCGTGAGGGTCGCG 256249 Query 94429 GC--CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 || | || |||| || || ||| | ||| || || | || | ||| | Sbjct 256250 GCCGCGAGACCGTTA--GA-GCCCAAAAGATCTGGTATGCCATTCTAGAGGCCCAGACCG 256306 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| || | || | ||| | | ||||||| ||| |||| ||| |||||| || Sbjct 256307 AGACTGGAAACCCATTCATGCTTTACAAGGACGCTGCCAACCGTAAGAGCAACCAAAAGA 256366 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 ||||||| ||| ||||| || || ||||||||||| | ||||| ||| |||| | Sbjct 256367 ACCTCGGCACCATCCGCAGCTCCAACCTCTGCACCGAGATCATTGAGTACACTGCTCCCG 256426 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 | ||| |||| || |||||||| | ||| || Sbjct 256427 ATGAGGTTGCCGTCTGTAACCTTGCCTCTAT 256457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720039955560