Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq13 203 4e-47 seq497 107 2e-18 >seq13 Length=329804 Score = 203 bits (224), Expect = 4e-47 Identities = 652/1002 (65%), Gaps = 11/1002 (1%) Strand=Plus/Minus Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 116409 ||| |||| || |||| || | ||| || ||||| | | | ||||| | | ||| Sbjct 256541 TTTCTGGTAACGACCTGGGTTACTTCGTGGAGCTTCTTGAAGTCAAATCGCTCATTCTGG 256482 Query 116410 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469 || |||||| | || || || || || || || ||||| || | |||||| | Sbjct 256481 ATATCGACATAGGTCGGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGA 256422 Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529 |||||||||| || || || || || | || || || |||||||| | ||||||| Sbjct 256421 GCAGTGTACTCAATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTT 256362 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 || || ||| ||| || |||||||| ||||| |||| | || ||||| || Sbjct 256361 TGGTTGCTCTTACGGTTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTC 256302 Query 116590 TGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 116649 |||| || ||||| || | ||| | | |||| || || || | | || ||| Sbjct 256301 TGGGCCTCTAGAATGGCATACCAGATCTTTTGGGCTCTAACGGTCTCGCGGCCGCGACCC 256242 Query 116650 TCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCT 116709 || |||||| | ||| || | ||||| || || || | || | ||| || Sbjct 256241 TCACGCTCGTATCTCTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCA 256182 Query 116710 GGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 116769 || || || ||| || | ||||| ||| || || | || |||||||||||| Sbjct 256181 GGGCACTCATTTGGGCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAG 256122 Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 116829 || ||||| |||||||| || ||||||| || || || ||||||| | || || Sbjct 256121 AGATCTGGAATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGG 256062 Query 116830 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 116889 || ||| | |||| ||| ||| | |||||| ||||| || || || || | || Sbjct 256061 TTCTTACGGAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCA 256002 Query 116890 ATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACG 116946 | | || ||| |||| | |||| |||||||| || || ||| || ||| Sbjct 256001 AAGGCACCTGGGCGTTTGTTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACG 255942 Query 116947 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGT 117004 || ||||| || | | ||||| || ||| || || || | || || ||| | || Sbjct 255941 CGGAGCATGGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAG-CCAGT 255883 Query 117005 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGC 117064 | ||||||| | |||| | || ||| || || || || ||| ||||| || | Sbjct 255882 T-GCTCTGATACGGTGGGCATTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGCAC 255824 Query 117065 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 117124 || | | || || ||||||| ||||| || |||| |||| | |||||||||||| Sbjct 255823 ACGTCTTCAGTGTGTCGTAGATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGC 255764 Query 117125 AGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 117183 | | | || ||| | ||| |||||||| ||||||||||||| | ||||| || Sbjct 255763 A-CGAGGCAAGCTGGGCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTG 255705 Query 117184 AACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTG 117242 || ||| | | ||||||| | ||| ||||| | || |||||| || ||||| Sbjct 255704 AA-GTACTTGTTGGACATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCGTG 255646 Query 117243 AATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 117302 |||||| | | || ||||| | ||||| ||||| ||| | | ||||||| Sbjct 255645 AATACCCACAGCAACACGCATGATCATGTGCTGGGGACGTTCAGCGACCTTTCCATCGAT 255586 Query 117303 CCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 | | ||||||| | |||||| ||||| | ||| || || Sbjct 255585 ACGCAGGAGGTAGGACCTCTCCAGTGTCTTAAAACCGAAGTA 255544 >seq497 Length=111328 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 ||||| |||||||||||||| || || |||||| ||||||| |||||| || |||||| Sbjct 104787 CCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCTGCCATGAGGCCACGCTTC 104846 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| || | |||||| |||||||||||||| ||||| || ||||| Sbjct 104847 TTGAGCCAGAAGATGGAGGCAAATGAACCAGAGAAGAAGATACCCTCAACGGCGGCGAAA 104906 Query 127658 GCAA 127661 |||| Sbjct 104907 GCAA 104910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503281222760