Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq497 154 2e-32 seq13 104 4e-17 >seq497 Length=111328 Score = 154 bits (170), Expect = 2e-32 Identities = 538/834 (65%), Gaps = 7/834 (1%) Strand=Plus/Plus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 ||||||| || |||||||||||||| | | ||| || |||||||| |||| |||| Sbjct 104494 TCTTCTCAAAGAAGTTGGTCTTGCCAGCGAGGGAAATGTTCTCCATGAAGTCGAAGGGGT 104553 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 | | | || ||| |||| ||||| || || | | |||||| || || | Sbjct 104554 TAGTGGCATGGTAGTGCTTGCTGTTGCCGAGGGCGAGTAGGAGACGGTCTGCAACGAACT 104613 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 ||||||| ||||| ||| || || || |||| | | || || || || | Sbjct 104614 CGATGTACTGGCACATGAGCTTGGCATTCATACCGAGCAACGCACAAGGCAGGGCGTCAG 104673 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 || ||||||| |||||| |||| || ||| | || | ||| | | | Sbjct 104674 TAAGGAACTCCTGCTCAATAGCGACGGCCTCGACGATGATGGACTCGACCAGAGCTTGGT 104733 Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 | |||||| | || ||| || || ||||| || |||||| ||||| |||| Sbjct 104734 CAGGCTTGTGCT---TGAGGTGAGAGAAAAGAAGGCAGGCGAAGTCGGTGTGCATGCCCT 104790 Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007 | || || ||||||| ||||||||| | | |||| || | ||||| |||||| |||| Sbjct 104791 CATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCTGCCATGAGGCCACGCTTCTTGA 104850 Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCA 160067 |||| || |||| ||||| | ||| || ||||| ||||| ||||| || || || | Sbjct 104851 GCCAGAAGATGGAGGCAAATGAACCAGAGAAGAAGATACCCTCAACGGCGGCGAAAGCAA 104910 Query 160068 CGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCT 160127 ||||| | || | | ||| |||| | ||||||| ||||| ||||||| Sbjct 104911 TAAGCCTGCAGGCGAATGTGCTGTTCTTGTCGCTGATCCACCTCAAAGCCCAGTCAGCCT 104970 Query 160128 TCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCCTTCACA 160186 |||| |||||| || ||| |||| |||||| || | | ||||| || ||| Sbjct 104971 TCTTGCGGATGCAAGGAATGTTGTCGATGGCGTTGAAGAGGTAGGTCCT-CTGCTTGGGT 105029 Query 160187 TCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCC 160246 || |||| || | || || ||||| |||| | ||| | || || || Sbjct 105030 TCACTGATGTAGGTGTCGATGAGGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATG 105089 Query 160247 ATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGA 160306 ||||| || |||||| | | ||||| | ||||||||| |||| | | Sbjct 105090 ATCTGGAATCCGTAGAAGCACCTGGCCTCTGGGATCTGCACCTCACCACTGAAACGCTCG 105149 Query 160307 CCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATG 160366 | || || | || || | || |||| ||| || ||||| || | ||||| |||||| Sbjct 105150 ACAAGGTTCTCGTTGACGATGCCATCGGAGGCAGCGAAGAAGGCGAGAACGTGGGAGATG 105209 Query 160367 AAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATC 160425 ||| | |||||| | ||||| | ||| | ||||| ||| | || | || || ||| Sbjct 105210 AAAAAGCGCTCGTCGTCATTGAGACGCTTGTTCCAGTCGTG-AAGATCCTTGGACAGATC 105268 Query 160426 AACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 | ||| || ||| |||| | |||| || | |||||||| |||||| Sbjct 105269 GATCTCCTCGGCGGTCCAGAAAGAGGCCTCTGCCTTCTTGTACATCTGCCAGAT 105322 >seq13 Length=329804 Score = 104 bits (114), Expect = 4e-17 Identities = 390/602 (65%), Gaps = 10/602 (2%) Strand=Plus/Minus Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACA 205119 ||||||| | ||| ||| | |||| ||| ||||| || || || || || || Sbjct 256236 CTCGTATCTCTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCA 256177 Query 205120 TTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | || || ||||| |||| ||| | | |||| || | || ||| || || || Sbjct 256176 CTCATTTGGGCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAGATC 256117 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 ||||| ||| |||| || || |||||||| | | | | || | ||| ||||||| Sbjct 256116 TGGAATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTT 256057 Query 205240 TTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGC 205299 | ||||| | ||| || || || ||||| ||||| | | | ||| | || Sbjct 256056 ACGGAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGC 255997 Query 205300 GCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC-GTTGAAAACTCGCA 205358 ||||| | ||||| ||||| |||||||| || | | || | |||||| || || | Sbjct 255996 ACCTGGGCGTTTGTTACCACCTTGGTCCAC-ATACCTGGCAGTGTTGTTGAACACGCGGA 255938 Query 205359 GCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCC 205418 |||| ||||||||||| |||| ||| ||||| || | | | ||| ||||| || | Sbjct 255937 GCATGGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTTGCTC 255878 Query 205419 T--CACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCAC-T 205475 | ||| ||| || | || || || |||| ||||| |||| ||| ||| | Sbjct 255877 TGATACGGTGGGCAT--TCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGCACACGT 255820 Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-ACCAGATAGCAC 205534 ||| ||| ||| |||||| || | ||| || ||| || | || | || ||||| Sbjct 255819 CTT-CAGTGTGTCGTAGATACCATCAATGCTGTCATCCTTCA-TATCGATGAGGAAGCAC 255762 Query 205535 GAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAG 205594 || || |||| ||| ||| || || |||||| || || |||||| ||||| Sbjct 255761 GAGGCAAGCTGGGCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAG 255702 Query 205595 CGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATA 205654 ||| | | || | |||| ||||| | | ||||| | || |||||||||| Sbjct 255701 TACTTGTTGGACATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCGTGAATA 255642 Query 205655 CC 205656 || Sbjct 255641 CC 255640 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || ||||||||||||||||| | ||| || ||| ||| | |||||| | | Sbjct 257330 AGGTAGTACATGCCGGTCTTCAAGCCGAGCTTCCAGCCGGTGAAATGCATGCTTGTGATC 257271 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 |||| || | | || || ||||||||||||||| || || ||||| ||||||| Sbjct 257270 TTGCCCATGGTAGGCTCCTTCATGTGAATGTTCAGGGATTGCGACTGGTCAATGAAAGCA 257211 Query 204005 GCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAAC 204064 | || || |||||||| | ||| ||||| ||| | ||||||||| |||||| || Sbjct 257210 CCACGGTCAGCGGCCATCTGGATGATGGTACGCTGGCTGAGCTCCCACACAGTCTTGTAC 257151 Query 204065 A 204065 | Sbjct 257150 A 257150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150120946160