Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq246 82.4 5e-11 >seq246 Length=221927 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 39507 CAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATC 39566 ||| ||||| || | |||||| || || || || || || || | || | | || Sbjct 102872 CAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGACAGTGTCCTGCCGTC 102931 Query 39567 GTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTC 39626 ||||| || || || | ||||| | ||||||||| || | ||| | |||||| ||||| Sbjct 102932 CTCCAACTGCTTGCCTGCGAAAATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 102991 Query 39627 GCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTG 39685 || ||| || | ||| | | | ||||||| ||| ||||| |||| || || | Sbjct 102992 TTGGATCTTTGACTTGA-CGTTGTCGATGGTGTCTGAGCTCTCCACTTCCAGGGTGATGG 103050 Query 39686 TTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || || || | ||| || |||||||||||||| Sbjct 103051 TCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 103084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347367436647263