Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq445 340 2e-88 seq46 113 6e-20 seq79 95.1 2e-14 >seq445 Length=483212 Score = 340 bits (376), Expect = 2e-88 Identities = 771/1152 (67%), Gaps = 12/1152 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| ||||| ||||| | || ||||| || || ||||| || ||||| Sbjct 441133 TCACCAGAAAGGATAGCGGCCTGGACGGCAGCACCGTACGCAACAGCCTCGTCAGGGTTG 441192 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAAC-ATTTGTTGAATTTTCGG 7128 || | | || | || || ||||| || | || | |||| | | || || || || Sbjct 441193 ATGGACCTGTTTGGCTCCTTTCCGTTGAAGAAGTC-GCTAACCAGCTTCTGGATCTTGGG 441251 Query 7129 GATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGA 7188 ||| || || || || ||||| | ||||| || | || || || |||||||||| Sbjct 441252 GATACGGGTAGAACCTCCGACAAGGACGATCTCGTGGACGGAGGACTTGTCGATCTTTGC 441311 Query 7189 GTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTC 7248 || || || || ||||| || ||||| |||||| | ||| |||||| || Sbjct 441312 ATCGCGGAGAGTGCGCTCGACTGGCTCCATGGTGCCACGGAAGAGATCCTGACACAGCTC 441371 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||| ||||| |||||||| ||||| || ||| | || || || ||| | | || ||||| Sbjct 441372 CTCGAAACGAGCACGGGTGATGGAGGTGTAGTAGTCGACACCTTCGAAGAGAGAGTCAAT 441431 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 ||||| | || || || | ||||| | || ||||| || ||||| || || || || Sbjct 441432 CTCAATCGAGGTCTGGGCGGAAGAAGAGAGGGTACGCTTGGCACGCTCGCAGGCGGTGCG 441491 Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 | ||||||||| ||||| | ||| | | ||||||||| | || || || || Sbjct 441492 CAGACGACGAAGCGCACGAGCGTTTGTAGTCAAATCTTTCTTGTTACGGCGCTTGAAGTC 441551 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 | ||||| | ||| | |||||| || |||||||||| ||| ||||| || Sbjct 441552 CTGTACAAAGTGATTGACGAGGCGGTTATCGAAGTCCTCACCACCCAGGTGAGTATCACC 441611 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 || || | ||||| || ||||| || | || || | || | ||| ||||| || || Sbjct 441612 GGCAGTGGACTTGACCTCGAAGATGCCCTCCTCGATCGTCAAGAGCGACACATCGAAAGT 441671 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 |||||||||| || || || || ||||| || | || | ||||| |||||||| Sbjct 441672 GCCACCACCCAAATCGAAGATCAGGACGTTGCGCTCTCCCTCAGTCTTCTTGTCGAGACC 441731 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 |||||| || || || ||||| || || ||||| || || ||| ||||| ||| ||||| Sbjct 441732 GTACGCAATGGCGGCAGCCGTAGGCTCGTTAATGATTCGCAGAACGTTCAAGCCTGCAAT 441791 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | ||||| || || ||| || || || || |||||||| || || || || Sbjct 441792 CAAGCCTGCATCCTTGGTGGCTGTGCGCTGGCTGTCATTGAAGTAGGCAGGTACGGTGAC 441851 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 || |||| |||| | | || | ||| | ||| || | || ||||||| || || Sbjct 441852 CACAGCGTTGTTGACGGTTGTGCCCAAATAGGCTTCGGCAGTCTCCCTCATTTTCGTGAG 441911 Query 7789 AACCATCGATGAAATCTCTTCAGCCG-CAAACTGTT-TCGTTTCACCGTTAAAATCAACT 7846 || ||| | ||||| || || | || ||| | || || | || || || || ||| Sbjct 441912 AATCATAGCAGAAATTTCCTCGGGCGTGAAAGTCTTGTCCTCTCCACG--GAATTCCACT 441969 Query 7847 TCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCG 7906 | || | || || |||| ||| | ||| | | | | ||||| || Sbjct 441970 TGTATGACAGGCTT---GCCAGCCTTCTCGATGATCTTGAAAGGGAAGTGCTTCATGTCT 442026 Query 7907 TCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTG 7966 ||||||| ||| | ||||| || ||||| |||||||| ||||| || || ||| Sbjct 442027 GACTGGACCTCGGAGTCGGTGAACTTCCTGCCGATGAGACGCTTGGCATCGAAGACGGTG 442086 Query 7967 TTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTT 8026 || ||||||||||| |||||||| || || || ||||| ||||| || | Sbjct 442087 TTGGCCGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---TGTG 442143 Query 8027 TCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCT 8086 || || || |||||| | || ||||| || || || || |||||||| || || || || Sbjct 442144 TCGGTGAAGGCGACGAAGGAAGGGGTTGTGCGGTTACCCTGGTCGTTGGCGATGATCTCG 442203 Query 8087 ACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATT 8146 | |||||| | | ||| || ||||| || || || || || | ||| |||||||| Sbjct 442204 ATGCGGTCATCTCTGAAGATACCCACGCAAGAGTAGGTGGTACCCAGATCGATACCGATA 442263 Query 8147 GCTTGAGTCATT 8158 || ||| |||| Sbjct 442264 GCGGGAGCCATT 442275 >seq46 Length=304048 Score = 113 bits (124), Expect = 6e-20 Identities = 256/379 (68%), Gaps = 11/379 (3%) Strand=Plus/Minus Query 7435 GAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGG 7493 ||||| ||| || || |||| |||||||| |||||||| | ||| || || || || | Sbjct 73934 GAAGTAGTC-AATGACTCTCTGGTCGAAATCCTCACCACCAAGGTGAGTGTCACCAGCAG 73876 Query 7494 TCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCAC 7553 | || | ||| || || | ||| || | | | | || ||||| || ||||||| Sbjct 73875 TAGCCTGGACCTCGAAAACACCCTGGTCGACAGTCAGAATGGAGACATCGAAAGTACCAC 73816 Query 7554 CACCCAG---GTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGT 7610 |||| || || | ||||| | ||| || | ||| | |||| ||||| || | Sbjct 73815 CACCAAGATCGTAGACAATGA--TCTGGCGT-TCCTGGTC---GGTCTTGTCGAGGCCAT 73762 Query 7611 ACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAG 7670 | |||| ||| || || || ||||| || | || ||| ||| ||| || || || || | Sbjct 73761 AGGCGAGAGCGGCGGCGGTGGGTTCGTTGACAACACGCAGAACGTTAAGACCGGCGATTG 73702 Query 7671 TTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGA 7730 | | || || || || || || || | ||||| |||||||| || || || || | Sbjct 73701 TGCCTGCGTCCTTGGTTGCGGCACGCTGGGCGTCGTTGAAGTAGGCTGGAACGGTGACAA 73642 Query 7731 CCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAA 7790 |||||| | |||| | || ||||| ||||| || |||| || ||||| || || | Sbjct 73641 CCGCGTGCTTGACCTCCTCGCCGAGGTACGACTCGGCGACCTCCTTCATCTTACCCAGGA 73582 Query 7791 CCATCGATGAAATCTCTTC 7809 ||| || |||| ||| || Sbjct 73581 TCATGGAAGAAACCTCCTC 73563 >seq79 Length=294129 Score = 95.1 bits (104), Expect = 2e-14 Identities = 200/299 (67%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | ||| || || || ||| | ||||| || |||| ||| Sbjct 160870 TCGAAATCTTCACCACCAAGGTGAGTGTCACCGTTGGTAGACTTGACCTCGAAGACACCG 160929 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || | || | || | ||| || ||||||||||||| ||| | | | || Sbjct 160930 TTGGAGATCTCCAAGACGGAGATATCGAAAGTACCACCACCCAAGTCGTAGACGGCGAC- 160988 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| | | ||| ||||||||||| |||| ||| || || || || || Sbjct 160989 -----AACGCGGTCGCTCTCCTTCTCGAGACCGTAGGCGAGAGCTGCGGCGGTGGGCTCG 161043 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| | ||| || |||||| || | || | ||||| || || || |||| | Sbjct 161044 TTAACGACACGGAGGACGTTCAGACCGGAGATCTGACCGGCATCCTTGGTAGCCTGTCTT 161103 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| ||||| ||||| || || || || ||||| |||| | || ||||| ||||| Sbjct 161104 TGCTGGTCGTTGAAGTATGCAGGAACAGTGACGACTGCGTTCTTGCAGTTCTTTCCGAG 161162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128743089240