Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq13 260 2e-64 seq497 122 1e-22 seq57 98.7 1e-15 >seq13 Length=329804 Score = 260 bits (288), Expect = 2e-64 Identities = 907/1395 (65%), Gaps = 33/1395 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || | ||||| || || || || ||||| || Sbjct 255610 CCCCAGCACATGATCATGCGTGTTGCTGTGGGTATTCACGGCGAGGACATTGAGAGTGCA 255669 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || ||||||| ||| |||| ||||| | ||||||||||| Sbjct 255670 ATTGAGACGTACAACTTGATGTCCAACAAGTAC-TTCACACACGCCTCTCCAACCCTCTT 255728 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 || |||||||| ||| | |||| | || || ||||| || | | ||||| || Sbjct 255729 CAGTGCTGGTACCCCACAAGCCCAGCTTGCCTCGTGCTTCCTCATCGATATGAAGGATGA 255788 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGGG 111846 || |||| || |||| ||| |||||| |||||| ||||| ||| | Sbjct 255789 CAGCATTGATGGTATCTACGACAC----ACTGAAGACGTGTGCCATGATCTCCAAGAACG 255844 Query 111847 CTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGG 111904 ||||||| ||||| || | ||| | ||||||| ||| | ||| || |||| || Sbjct 255845 CTGGTGGAATCGGTCTGAATGCCCACCGTATCAGAGC-AACTGG-CTCCTACATTAGCGG 255902 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 ||| || || || ||||| | | || ||||| ||||| || ||| ||| || | Sbjct 255903 TACCAACGGCACCTCCAATGGTCTGGTGCCCATGCTCCGCGTGTTCAACAACACTGCCAG 255962 Query 111965 CTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 ||||| |||||| ||| ||| || | | || | ||||| |||||||| Sbjct 255963 GTATGTGGACCAAGGTGGTAACAAACGCCCAGGTGCCTTTGCCATATATCTCGAGCCATG 256022 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 ||| |||||| | ||| ||||| || | ||| ||||| || | || || | || Sbjct 256023 GCATGCGGATGTTTTGGCCTTCCTGGATCTCCGTAAGAACCACGGAAAAGAAGAAGTCCG 256082 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| || ||||||| ||| ||||||||||||||||||||||||||| | || | || Sbjct 256083 TGCCCGTGACCTCTTCTACGCCCTCTGGATTCCAGATCTCTTCATGAAGCGTGTCCAAGA 256142 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | |||| ||| ||||| | || ||| | || || |||||| | |||| | || Sbjct 256143 TAACGGCACCTGGACTCTCATGTGCCCAAATGAGTGCCCTGGTCTCGCTGATGTCTACGG 256202 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGG 112260 || || ||||||| || ||| | |||||| || |||| ||| | | ||| | Sbjct 256203 CGATGAATTTGAAGAGCTTTACGAGAGATACGAGCGTGAGGGTCGCGGCCGC-GAGACCG 256261 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | ||| | | ||| | || ||||| || | || ||||||||||| | |||| Sbjct 256262 TTAGAGCCCAAAAGATCTGGTATGCCATTCTAGAGGCCCAGACCGAGACTGGAAACCCAT 256321 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||||||||| ||||| |||| ||||| || |||||||| | || ||| Sbjct 256322 TCATGCTTTACAAGGACGCTGCCAACCGTAAGAGCAACCAAAAGAACCTCGGCACCATCC 256381 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || ||||||||||| || || ||| | || | || | |||||| || || | Sbjct 256382 GCAGCTCCAACCTCTGCACCGAGATCATTGAGTACACTGCTCCCGATGAGGTTGCCGTCT 256441 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 112500 ||||||| || || || || || || | ||||| ||| ||| || |||||| | Sbjct 256442 GTAACCTTGCCTCTATTGCGCTGCCGACCTATGTCGATATCCAGAATGAGCGATTTGACT 256501 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || ||||||||||| || | || || | |||| | |||| | ||||| Sbjct 256502 TCAAGAAGCTCCACGAAGTAACCCAGGTCGTTACCAGAAACTTGAACAAGATCATTGAGG 256561 Query 112561 GAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || ||||| || |||| ||||| || || | | |||||||| |||| Sbjct 256562 TCAACAAATACCCTGTACCTGAG---GCTCGCAAGGGCAACTTCCGCCACCGTCCGATTG 256618 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCC 112676 |||| |||||| | ||| | || |||| ||| | | || ||| |||| || || Sbjct 256619 GTCTTGGTGTCAATGGTTTGGCAGATGCTTTCCTCGCCCTG-CGCATGCCATTCGACTCT 256677 Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA- 112735 ||||| | |||| | || || ||||| || || ||||||||| |||| Sbjct 256678 CCTGAAGCACGCCAGCTCAACATCCAAATCTTCGAGACTATCTACCACGCCGCT-TTGAC 256736 Query 112736 GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795 ||| | || | || || |||||| || || |||| || || || || | Sbjct 256737 CGCGTCTAGCGATCTCGCTGAAAAGCTTGGTCCTTACGAGACCTACGAAGGCTCACCTGT 256796 Query 112796 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGAC 112853 || | || | |||||||| || ||||||| || | || | || || | || Sbjct 256797 CTCGAAGGGTGAGCTTCAATACGACATGTGGG-GTGTCACCCCCA-CTGATCTTTGGGAT 256854 Query 112854 TGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 112913 |||| || ||||| | || | | | ||| | |||||| ||| | | || Sbjct 256855 TGGGCTGCCCTCAAAGCGAAGATTGCGCAAACCGGTGTGCGTAACTCTCTCCTCGTTGCC 256914 Query 112914 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 112973 ||||||||||| || || ||| | || ||| |||| || |||||||| ||||| ||| Sbjct 256915 CCAATGCCAACTGCTTCGACCTCCCAGATCATGGGATTCAACGAATGCTTCGAACCATAC 256974 Query 112974 ACGACGAACATCTAT 112988 || | ||||||||| Sbjct 256975 ACAAGCAACATCTAT 256989 >seq497 Length=111328 Score = 122 bits (134), Expect = 1e-22 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 |||||||||||||||||||||||||| || | | || | |||||||||||||| || Sbjct 104896 GTTGAGGGTATCTTCTTCTCTGGTTCATTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGC 104837 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||||| |||||||| ||||||||||||||| ||||| ||||| ||||| Sbjct 104836 CTCATGGCAGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGG 104787 >seq57 Length=303147 Score = 98.7 bits (108), Expect = 1e-15 Identities = 276/416 (66%), Gaps = 21/416 (5%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 ||||| || |||||||| || | | ||| | ||| |||| |||| || || || || Sbjct 23769 CGATCGAAACGACCTGGTCGCATCAACGCTTTATCGAGGACATCAGGTCGGTTGGTACCG 23710 Query 15945 GCGATGACAACAA-TACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTT 16003 || | || || | | || | || | ||| || ||||| ||||| | | |||||| Sbjct 23709 GCAAGCACGACGACTTGCTCACTGGTGTTGAAA-CCGTCCATTTCTGTGAGGATCTGGTT 23651 Query 16004 AATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACC--AGCACTGCGTTGC------ 16055 | || ||| ||||||||||| | ||| || | | ||| | || Sbjct 23650 CAATGTCGATTCTCGTTCATCATTGCC------ACCGCCGAACGATTGCTTGGCACGAGA 23597 Query 16056 -TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGA 16113 || || | |||||||||||||| ||||| | ||| || ||| || ||||| | || Sbjct 23596 CTTGCCTATCGCATCAATCTCATCGATGAAAATGATACAAGGTGTGTTTTTC-CTCGCAT 23538 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 |||| | ||| || ||||| | ||| ||||| || ||||||||||| || | | Sbjct 23537 TAGCAAACAAATCTCGCACACGTGAAGGGCCAACACCGACGAACATCTCCACGAATTCAG 23478 Query 16174 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | || || | || ||| || || ||||| || ||| | ||| ||||| | | Sbjct 23477 ATCCAGA-CACCGAGAAGAACGGTACCCCTGATTCTCCAGCAGTTGCTTTCGCGAGCAAA 23419 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||||||| ||||| || ||| | ||||| |||||||| || ||||||||||| Sbjct 23418 GTCTTACCAGTACCAGGGGGACCGGAGAGGATTGCACCTCGAGGGATCTTGGCGCC 23363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738435007920