Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq13 165 1e-35 seq57 134 2e-26 >seq13 Length=329804 Score = 165 bits (182), Expect = 1e-35 Identities = 1097/1746 (63%), Gaps = 51/1746 (3%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGAT--- 109556 ||||| || || ||||| || ||||| |||||| ||||| ||||| | |||||| Sbjct 257241 GTTCAGGGATTGCGACTGGTCAATGAAAGCACCACGGTCAGCGGCCATCTGGATGATGGT 257182 Query 109557 ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC 109616 || || |||| | ||||| |||||||||||||| ||||| |||||| || |||| Sbjct 257181 ACGCT---GGCTGAGCTCCCACACAGTCTTGTACAATGCCTTGAGATCATCTGGGATGTT 257125 Query 109617 CACGATGTTTTGAATAGAGCCACCAGCCTTCACC-ATGA---GATCCTTCATCTCTTTCG 109672 |||| ||| | ||||||||| ||| | |||| | | |||||| | | Sbjct 257124 GGGGATGCGTTGGACCGAGCCACCA----TCAGCGATGATTCGGTTCTTCATGTTGTCAC 257069 Query 109673 ACCAGAGACCGACCTTTTT-GAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCA 109731 ||| | ||| || || |||||| | | || |||||| || || ||| Sbjct 257068 TCCACAAACC-ACGTTCGACGAGATCCTTGAGTAGCCAGGGGTTGACAACTTGGAACTCA 257010 Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791 || ||||| || || |||||||| | ||||| |||||||| || || ||| Sbjct 257009 CCCGCAAGCACACGGCGCGAATAGATGTTGCTTGTGTATGGTTCGAAGCATTCGTTGAAT 256950 Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851 || | ||| || | || ||||| || ||||| || || | ||| ||| ||| || | | Sbjct 256949 CCCATGATCTGGGAGGTCGAAGCAGTTGGCATTGGGGCAACGAGGAGAGAGTTACGCACA 256890 Query 109852 CCCTTCGTCTTTACCCGCTCA-CGCATTGCGT----CCCAATCATAACGACCACTAAATT 109906 || | || | | || ||| ||| | ||||||| || || || | Sbjct 256889 CCGGT-----TTGCGCAATCTTCGCTTTGAGGGCAGCCCAATCCCAAAGATCAGTGGGG- 256836 Query 109907 TAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGA 109966 || |||| |||||| || |||||| |||||| | |||| || || | | Sbjct 256835 --GTGACACC---CCACATGTCGTATTGAAGCTCACCCTTCGAGACAGGTGAGCCTTCGT 256781 Query 109967 AACTCTCGTACGACCCCTCAACCT---CGGCCAACTCGGATGAAGCCTCTAGTGCCGCAT 110023 | ||||||| | || || || | || | ||| || || | || || | Sbjct 256780 AGGTCTCGTAAGGACC---AAGCTTTTCAGCGAGATCGCTAGACGCGGTCAAAGCGGCGT 256724 Query 110024 GATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA 110083 | || |||||||| || || || || | |||| | || | ||||||| || | Sbjct 256723 GGTAGATAGTCTCGAAGATTTGGATGTTGAGCTGGCGTGCTTCAGGAGAGTCGAATGGCA 256664 Query 110084 GAC-CACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGC 110142 | || || ||| |||| || | ||| | ||||| |||||||| || || || Sbjct 256663 TGCGCAGGGCGAGGAAAG-CATCTGCCAAACCATTGACACCAAGACCAATCGGACGGTGG 256605 Query 110143 TTCATGTTAGAGCGT-CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATT 110201 | ||| | | | ||||| ||| ||||| |||| || |||| | || Sbjct 256604 CGGAAGTT-GCCCTTGCGAGCCTCAGGTACAGGGTATTTGTTGACCTCAATGATCTTGTT 256546 Query 110202 GAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGT 110261 | || | || || || || | ||| ||||| || | | | || || | | Sbjct 256545 CAAGTTTCTGGTAACGACCTGGGTTACTTCGTGGAGCTTCTTGAAGTCAAATCGCTCATT 256486 Query 110262 CTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTC 110321 || ||| |||||| | || || |||||||| ||||| || || || | | ||| || Sbjct 256485 CTGGATATCGACATAGGTCGGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATC 256426 Query 110322 TTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTT 110381 | ||||| || | || || || || | |||||| || ||| || | ||| Sbjct 256425 GGGAGCAGTGTACTCAATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTT 256366 Query 110382 CTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTC 110441 ||| || || || |||| || ||||| || |||||| ||||| | ||||| || Sbjct 256365 CTTTTGGTTGCTCTTACGGTTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTC 256306 Query 110442 CGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAG 110501 ||||| | || |||||||| | ||| | | ||| || || || || | Sbjct 256305 GGTCTGGGCCTCTAGAATGGCATACCAGATCTTTTGGGCTCTAACGGTCTCGCGGCCGCG 256246 Query 110502 ACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAG 110561 ||| || |||||| | ||| | || |||||||| | ||||| ||||||| || Sbjct 256245 ACCCTCACGCTCGTATCTCTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAG 256186 Query 110562 ACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCAT 110621 ||| || | || || | ||| | ||| | || || | || | |||||| Sbjct 256185 ACCAGGGCACTCATTTGGGCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCAT 256126 Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681 ||| || || |||||||| | || |||| ||||||||| ||| | ||||| | || Sbjct 256125 GAAGAGATCTGGAATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCC 256066 Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741 ||||| || || |||| ||| ||| | ||||| |||||||| |||||||| | Sbjct 256065 GTGGTTCTTACGGAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATAT 256006 Query 110742 AGCGATGGATCCCTTACGACG---ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 || | || || || ||| | |||| ||||| | || ||| ||||| Sbjct 256005 GGCAAAGGCACCTGGGCGTTTGTTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAA 255946 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 || | |||||| || | | |||| ||| || || ||||| ||||| ||| Sbjct 255945 CACGCGGAGCATGGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCC 255886 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 | | || | || |||| || || ||| || ||||| || ||| || || Sbjct 255885 AGTTGCTCTGATACGGTGGGCATTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGC 255826 Query 110919 ACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 |||| ||| | ||||| | || ||||||||||| || |||| | | || || | Sbjct 255825 ACACGTCT-TCAGTGTGTCGTAGATACCATCAATGCTGTCATCCTTCATATCGATGAGGA 255767 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 |||| || | | ||| | | || || || ||| ||||||| || || | || || Sbjct 255766 AGCACGAGGCAAGCTGGGCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTG 255707 Query 111038 TGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACC 111095 |||| | |||| ||||||| |||||| || || | ||| | || | || Sbjct 255706 TGAA--GTACTTGTTGGACATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCC 255649 Query 111096 GTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATC 111155 ||||||||| | ||||| ||||||| ||| | || || ||| | ||||||||| Sbjct 255648 GTGAATACCCACAGCAACACGCATGATCATGTGCTGGGGACGTTCAGCGACCTTTCCATC 255589 Query 111156 AACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATC 111215 | |||| | ||||| | |||| || ||||| | ||| |||||| | | |||||| Sbjct 255588 GATACGCAGGAGGTAGGACCTCTCCAGTGTCTTAAAACCGAAGTATTGGTAGTTGAAATC 255529 Query 111216 ACGATC 111221 ||| || Sbjct 255528 ACGGTC 255523 >seq57 Length=303147 Score = 134 bits (148), Expect = 2e-26 Identities = 280/411 (68%), Gaps = 11/411 (3%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||||||||||||||| || | | || | ||| || | ||| ||||| ||| || Sbjct 23769 CGATCGAAACGACCTGGTCGCATCAACGCTTTATCGAGGACATCAGGTCGGTTGGTACCG 23710 Query 11563 GCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 |||| || || | | |||| || | ||||||||||||||||||||| | |||| Sbjct 23709 GCAAGCACGACGA---CTTGCTCACTGGTGTTGAAACCGTCCATTTCTGTGAGGATCTGG 23653 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCC--GAACGCTTCTTA 11676 || | ||| ||| || ||||| ||| | || | | ||| | ||| ||| Sbjct 23652 TTCAATGTCGATTCTCGTTCATCATTGCCACCGCCGAACGATTGCTTGGCACGAGACTTG 23593 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 || | || ||||||||||||||||| | |||||| ||| ||| | || | | Sbjct 23592 CCTATCGCATCAATCTCATCGATGAAAATGATACAAGGTGTGTTTTTCCTCGCATTAGCA 23533 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || | || || ||||| | |||||||| ||||||||||| ||||| | | || Sbjct 23532 AACAAATCTCGCACACGTGAAGGGCCAACACCGACGAACATCTCCACGAATTCAGATCCA 23473 Query 11797 GAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 || ||| || | ||| || || || || ||||| | ||| ||||| | |||||| Sbjct 23472 GA-CACCGAGAAGAACGGTACCCCTGATTCTCCAGCAGTTGCTTTCGCGAGCAAAGTCTT 23414 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 ||| |||||||| | ||| | ||| | || || || ||||||||||| || Sbjct 23413 ACCAGTACCAGGGGGACCGGAGAGGATTGCACCTCGAGGGATCTTGGCGCC 23363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972237915800