Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq13 183 4e-41 seq57 91.5 2e-13 seq497 86.0 7e-12 >seq13 Length=329804 Score = 183 bits (202), Expect = 4e-41 Identities = 608/939 (65%), Gaps = 9/939 (1%) Strand=Plus/Minus Query 106444 ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 106503 || |||||| | || || || || || || | || || || || |||||| | | Sbjct 256479 ATCGACATAGGTCGGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGAGC 256420 Query 106504 TGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 106563 |||||||| | || || || || | |||||| || || || || | |||||||| Sbjct 256419 AGTGTACTCAATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTG 256360 Query 106564 GTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 ||| ||||| |||| || |||||||| |||||| | || | || ||||| ||||| Sbjct 256359 GTTGCTCTTACGGTTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTCTG 256300 Query 106624 TGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTC 106683 | || ||||| || | ||| | | |||| || | || | | || ||||| Sbjct 256299 GGCCTCTAGAATGGCATACCAGATCTTTTGGGCTCTAACGGTCTCGCGGCCGCGACCCTC 256240 Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743 |||||| | ||| || ||||||| || || || | || | |||||| || Sbjct 256239 ACGCTCGTATCTCTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGG 256180 Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803 || | ||| || | |||| ||| || || | || ||||||||||| || Sbjct 256179 GCACTCATTTGGGCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAG 256120 Query 106804 GTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGT 106862 ||||||||||| |||| | ||||| || | ||| || | ||||| | || |||| Sbjct 256119 ATCTGGAATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGA-CTTCTTCTTTTCCGTGGT 256061 Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 | || | || ||||| ||| | |||||| ||||||||||| ||||| | || | Sbjct 256060 TCTTACGGAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAA 256001 Query 106923 TAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 106978 | || | || | || | |||| | ||||| | || ||| ||| || ||| Sbjct 256000 AGGCACCTGGGCGTTTGTTACC-ACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACG 255942 Query 106979 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTG 107038 || ||||| || | | ||||| || || || || || | ||| || | | Sbjct 255941 CGGAGCATGGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTT 255882 Query 107039 GCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACAC 107098 ||||| | | ||| | || || || || ||||| ||| ||||| |||||| Sbjct 255881 GCTCTGATACGGTGGGCATTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGCACAC 255822 Query 107099 TCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAA 107158 | | || || | |||||||| | || ||| ||||| | |||| |||||||| Sbjct 255821 GTCTTCAGTGTGTCGTAGATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGCAC 255762 Query 107159 CTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAAC 107218 || | ||| | | ||| ||||||||| ||||||||||||| | ||||| |||| Sbjct 255761 GAGGCAAGCTGGGCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAA- 255703 Query 107219 ATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGAT 107277 ||| | | ||||||| || ||| ||||| | || |||||||| || ||||| || Sbjct 255702 GTACTTGTTGGACATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCGTGAAT 255643 Query 107278 GCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCG 107337 || | || |||||||| | ||||| ||||| ||| || | ||||||| || Sbjct 255642 ACCCACAGCAACACGCATGATCATGTGCTGGGGACGTTCAGCGACCTTTCCATCGATACG 255583 Query 107338 TTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 | || ||| | |||| || || || | ||| ||||| Sbjct 255582 CAGGAGGTAGGACCTCTCCAGTGTCTTAAAACCGAAGTA 255544 >seq57 Length=303147 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATTTCAAAGAG 9430 |||||||||||||| ||||| | ||||| ||| || ||||| | || | |||| | Sbjct 23586 GCATCAATCTCATCGATGAAAATGATACAAGGTGTGTTTTTC-CTCGCATTAGCAAACAA 23528 Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACA 9490 ||| || || | | | ||| ||||| || ||||||||||| || | | | || || Sbjct 23527 ATCTCGCACACGTGAAGGGCCAACACCGACGAACATCTCCACGAATTCAGATCCAGA-CA 23469 Query 9491 TTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 | || ||| || || ||||| || ||| | ||| ||||| | ||||||||| | Sbjct 23468 CCGAGAAGAACGGTACCCCTGATTCTCCAGCAGTTGCTTTCGCGAGCAAAGTCTTACCAG 23409 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 |||| || ||| | ||||| ||||| || || ||||||||||| Sbjct 23408 TACCAGGGGGACCGGAGAGGATTGCACCTCGAGGGATCTTGGCGCC 23363 >seq497 Length=111328 Score = 86.0 bits (94), Expect = 7e-12 Identities = 290/442 (66%), Gaps = 16/442 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| || |||| ||||||||||||||||||||| ||| | ||| |||||| ||||| Sbjct 104481 TAGTCACCGACTCTCTTCTCAAAGAAGTTGGTCTTGCCAGCGAGGGAAATGTTCTCCATG 104540 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTG--GCACCCCAACTTGTTTGAGGAGAC 117103 ||||| || || || | || | | || || | || | | | ||||||| Sbjct 104541 AAGTCGAAGGGGTTAGTGGCATGGTAG-TGCTTGCTGTTGCCGAGGGCGAGT-AGGAGAC 104598 Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163 | || | || |||| ||||||| | |||| || | |||||||||| | || Sbjct 104599 GGTCTGCAACGAACTCGATGTACTGGCACATGAGCTTGGCATTCATACCGAGCAACGCAC 104658 Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223 | || || ||||| | |||| | | |||||| | || ||||| | ||||| | Sbjct 104659 AAGGCAGGGCGTCAGTAAGGAACTCCTGCTCAATAGCGACGGCCTCGACGATGATGGACT 104718 Query 117224 GGAT---AGTTTCGGTAG--TGGGTCTATTACGCAA-AGTCTTGAAGAGCTCCACGGCAA 117277 || || || | || | | || | | | | || |||| || ||| | Sbjct 104719 CGACCAGAGCTTGGTCAGGCTTGTGCT-TGAGGTGAGAGAAAAGAAGG----CA-GGCGA 104772 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| | |||||||| ||||| || || || || |||||| || |||| || Sbjct 104773 AGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCTGCCA 104832 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 |||| || |||||||| | ||| | || | | ||||| || |||||||||||||||| Sbjct 104833 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAATGAACCAGAGAAGAAGATACCCT 104892 Query 117398 CCACACACGCAAACGCAAAAAG 117419 | || || || |||| ||| Sbjct 104893 CAACGGCGGCGAAAGCAATAAG 104914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977031497640