Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq246 105 5e-18 >seq246 Length=221927 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338 || || || || ||||| || | | || ||| | || ||||| ||||| ||||| || Sbjct 102894 TCCTTCTGGATGTTGTAGTCTGACAGTGTCCTGCCGTCCTCCAACTGCTTGCCTGCGAAA 102953 Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 || | |||||| || || || ||||||||||| || ||||| || ||| || || | Sbjct 102954 ATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTTGACTTGACGTTG 103013 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | ||||| || | |||||||| || |||| || |||||||| | ||| || || Sbjct 103014 TCGATGGTGTCTGAGCTCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACG 103073 Query 101459 AATATCTGCAT 101469 || |||||||| Sbjct 103074 AAGATCTGCAT 103084 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || || || || || ||||| |||| | || | | | || || | |||| Sbjct 103566 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGTTGC 103625 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | |||||| || || || ||||||||||| || || || || || Sbjct 103626 TTTCCAGCAAAGATAAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTG 103685 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||| | || | ||||| || | || || |||||||||| || |||||||| Sbjct 103686 GACTTTACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 103744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275932052427