Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq497 219 8e-52 seq13 203 6e-47 >seq497 Length=111328 Score = 219 bits (242), Expect = 8e-52 Identities = 571/854 (67%), Gaps = 34/854 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || ||||| |||||||||||||| ||||| || | | || |||||||| Sbjct 104477 CTGGTAGTCACCGACTCTCTTCTCAAAGAAGTTGGTCTTGCCAGCGAGGGAAATGTTCTC 104536 Query 47899 CATGAAGAGGAAGGGGTTGGGTG--TGTTA-TACACCCGTGTCAGGCCCATCTGTTCCAG 47955 ||||||| ||||||||| | | || || | | | ||| ||| | | | || Sbjct 104537 CATGAAGTCGAAGGGGTTAGTGGCATGGTAGTGCTTGC-TGTT--GCCGA---GGGCGAG 104590 Query 47956 CAGGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||| || || || ||| |||||||||| | ||||||| || ||||| || | Sbjct 104591 TAGGAGACGGTCTGCAACGAACTCGATGTACTGGCACATGAGCTTGGCATTCATACCGAG 104650 Query 48013 GAGGGACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCA 48071 | | ||| |||| || | || || ||||||| ||| || ||||| || | | Sbjct 104651 CAACG-CACAAGGCAGGGCGTCAGTAAGGAACTCCTGCTCAATAGCGACGGCCTCGACGA 104709 Query 48072 CAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGA 48125 || | || || || | ||| || || || ||||||| | | | Sbjct 104710 -----TGATGGACTCG--AC-CAGAGC-TTGGTCAGGCTTGTGCTTGAGGTGAGAGAAAA 104760 Query 48126 GCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGC 48185 | | |||||| ||||| |||||| ||| || || ||| ||||||| ||||||||||| Sbjct 104761 GAAGGCAGGCGAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGG 104820 Query 48186 AGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGA 48245 |||||| | ||||| || | || ||||||||||| || | || || || ||||||| Sbjct 104821 TGAGACCTGCCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAATGAACCAGAGA 104880 Query 48246 AGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGT 48305 ||||||| ||||| || || ||||| || | ||||| |||| | |||||||| Sbjct 104881 AGAAGATACCCTCAACGGCGGCGAAAGCAATAAGCCTGCAGGCGAATGTGCTGTTCTTGT 104940 Query 48306 CTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGG 48365 | |||||| | |||||||| |||||||| |||||| || || | || |||| Sbjct 104941 CGCTGATCCACCTCAAAGCCCAGTCAGCCTTCTTGCGGATGCAAGGAATGTTGTCGATGG 105000 Query 48366 CCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGC-AACATAGGTAGTGAGCAGCTTTGCG 48424 | |||||| | | | || | || || | | | ||||| || || | | Sbjct 105001 CGTTGAAGAGGTAGGTCCTCT-GCTTGGGTTCACTGATGTAGGTGTCGATGAGGAGAGAG 105059 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 || | || ||||| | ||||| || ||||||||| ||||||||| ||||||||| Sbjct 105060 TATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACCTGGCCTCT 105119 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 | |||||| || ||| | ||| | || ||||| ||||| || ||||| || Sbjct 105120 GGGATCTGCACCTCACCACTGAAACGCTCGACAAGGTTCTCGTTGACGATGCCATCGGAG 105179 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--A 48601 ||||| |||||||| || || || | |||| |||||||| || ||||| || Sbjct 105180 GCAGCGAAGAAGGCGAGAACGTGGGAGATGAAAAAGCGCTCGTCGTCATTGAGACGCTTG 105239 Query 48602 TTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 |||||| | || | || ||| ||| || | || || | |||||||| || || | Sbjct 105240 TTCCAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAGGCCTCT 105299 Query 48662 GCTTTTTTGTACAT 48675 || || |||||||| Sbjct 105300 GCCTTCTTGTACAT 105313 >seq13 Length=329804 Score = 203 bits (224), Expect = 6e-47 Identities = 471/694 (68%), Gaps = 22/694 (3%) Strand=Plus/Minus Query 213480 GGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCAT 213538 ||||| || || ||| ||||| || ||||| ||||| | | ||| | |||||||| || Sbjct 256466 GGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGAG-CAGTGTACTCAAT 256408 Query 213539 GATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGC 213598 |||||||||||| |||||| || ||||||||||| ||||||| ||||| ||| Sbjct 256407 GATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTACG 256348 Query 213599 GTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTAT 213658 |||||||| |||||||| |||||| | ||| || ||||| ||||| | | || || Sbjct 256347 GTTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTCTGGGCCTCTAGAAT 256288 Query 213659 CTGGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTC 213715 ||| ||||| | ||| || | | | | || | || || | | | ||| Sbjct 256287 --GGCATACCAGATCTTT-TGGGCT---CTAACGGTCTCGCGGCCGCGACCCTCACGCTC 256234 Query 213716 GTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG- 213774 ||| ||||| ||||| | ||||| | ||| |||| | || || || || Sbjct 256233 GTATCTCTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCACTC 256174 Query 213775 ATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCG 213834 || ||| |||||||| ||||| |||| |||| ||| | || |||||| || || | Sbjct 256173 ATTTGGG-CACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAGATCTG 256115 Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGC 213894 | | ||| || ||| ||| ||||| | || | || || ||| ||| || | Sbjct 256114 GAATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTTAC 256055 Query 213895 GCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGC 213954 | ||||| || ||| | || | ||||| ||||| ||||| | || ||||||||||| | Sbjct 256054 GGAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGCAC 255995 Query 213955 CCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGA 214011 | || | ||| || || |||||||| |||||| ||||||| | ||| || | Sbjct 255994 CTGGGCGTTTGTTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACGCGGAGCA 255935 Query 214012 CGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTA-TATACGAGCCGGAGGCCCTC 214070 ||| ||||| || ||||| |||||||| || |||| | || ||||| | || || Sbjct 255934 TGGGCACCAGACCATTGGAGGTGCCGTTGGTACC-GCTAATGTAGGAGCCAGTTGCTCTG 255876 Query 214071 AG--GTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCC 214128 | | || ||| ||| || || ||||| |||| ||||||||||||||| || | Sbjct 255875 ATACGGTGGGCATTCAGA--CCGATTCCACCAGCGTTCTTGGAGATCATGGCACACGTCT 255818 Query 214129 TCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162 ||| || || ||| || | ||||||||||| Sbjct 255817 TCAGTGTGTCGTAGATACCATCAATGCTGTCATC 255784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526849834240