Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq13 201 2e-46 seq497 196 9e-45 >seq13 Length=329804 Score = 201 bits (222), Expect = 2e-46 Identities = 564/854 (66%), Gaps = 19/854 (2%) Strand=Plus/Minus Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 ||| |||||||| ||||| ||||| || || |||| |||||||| || ||||| Sbjct 256452 GGCAAGGTTACAGACGGCAACCTCATCGGGAGCAGTGTACTCAATGATCTCGGTGCAGAG 256393 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 |||| || |||||| || |||| || || || ||| || |||||||||||||| Sbjct 256392 GTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTACGGTTGGCAGCGTCCTT 256333 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||| ||||| || || |||||||| ||| ||| | ||||| | ||||| | Sbjct 256332 GTAAAGCATGAATGGGTTTCCAGTCTCGGTCTGGGCCTCTAGAATGGCATACCAGATCTT 256273 Query 221893 TCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTC--GGTCTTTTCATACCCGGTATAGAG 221949 | ||| || || ||| || | | || |||||| | || | || | || || || Sbjct 256272 TTGGGCTCTAACGGTC-TCGCGGCCGCGACCCTCACGCTCGTATCT--CTCG---TAAAG 256219 Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009 | ||||| | || ||||| | || | || || || ||| || ||||| || Sbjct 256218 CTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCACTCATTTGGGCACATGAG 256159 Query 222010 ACTCCAG-TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCT 222068 | ||||| ||| ||| |||| ||| | || ||||||||| || || ||||| || || | Sbjct 256158 AGTCCAGGTGCC-GTTATCTTGGACACGCTTCATGAAGAGATCTGGAATCCAGAGGGCGT 256100 Query 222069 GAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128 ||||| || | || || || || |||| ||| || | ||||||| || Sbjct 256099 AGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTTACGGAGATCCAGGAAGG 256040 Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188 | |||| || || ||||| ||||| ||||| | ||| | || || || || ||||| | Sbjct 256039 CCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGCACCTGGGCGTTTGTTAC 255980 Query 222189 CACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCG 222247 |||| || ||||| ||| | || | |||||| | ||| || | || ||||| || Sbjct 255979 CACCTTGGTCCACATACCTGGC-AGTGTTGTTGAACACGCGGAGCATGGGCACCAGACCA 255921 Query 222248 TTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG---GCA 222304 ||||| |||||||| || ||||||| | || || || | ||| | ||| Sbjct 255920 TTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTTGCTCTGA---TACGGTGGGCA 255864 Query 222305 GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATG 222364 || ||||| ||||| |||| || ||||||||||| || |||| || ||||| | Sbjct 255863 TTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGCACACGTCTTCAGTGTGTCGTAG 255804 Query 222365 ATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTG 222424 || || || || ||| ||||| | | | || || || || | | ||| | || Sbjct 255803 ATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGCACGAGGCAAGCTGGGCTTGT 255744 Query 222425 GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGA 222484 | || || || | || || || ||| ||||||||| ||||| | ||||||| Sbjct 255743 GGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAGTACTTGTTGGACATCAAG 255684 Query 222485 TCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATG 222544 | ||||||||| | | || | |||| || |||||||| || || | |||| Sbjct 255683 TTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCGTGAATACCCACAGCAACACGCATG 255624 Query 222545 TACATGTACTGGGG 222558 ||||| |||||| Sbjct 255623 ATCATGTGCTGGGG 255610 >seq497 Length=111328 Score = 196 bits (216), Expect = 9e-45 Identities = 556/855 (65%), Gaps = 20/855 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||||||||| ||||| |||||| Sbjct 105322 ATCTGGCAGATGTACAAGAAGGCAGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 105263 Query 25537 GCCAAGGACATGGACGGCTGGTAC--GC-TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || || ||| ||| ||||| ||| ||| ||| Sbjct 105262 TCCAAGGATCTTCACGACTGGAACAAGCGTCT---CAATGACGACGAGCGCTTTTTCATC 105206 Query 25594 T---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| | || ||||| || ||||| ||||| || || |||||||| || |||| Sbjct 105205 TCCCACGTTCTCGCCTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTTGTCGAG 105146 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| | || |||||| | ||||||| ||| |||||||| |||||||| Sbjct 105145 CGTTTCAGTGGTGAGGTGCAGATCCCAGAGGCCAGGTGCTTCTACGGATTCCAGATCATG 105086 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGAC 25767 || || || | ||||| || || | || || || || ||||| | || Sbjct 105085 ATGGAGAACATCCACTCGGAAACATA---CTCTCTCCTCATCGACACCTACATCAGTGAA 105029 Query 25768 GTCGCCGAGAGAGATC-GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 | |||| || | || || |||||||| |||| || ||||| | ||| Sbjct 105028 CCCAAGCAGAG-GACCTACCTCTTCAACGCCATCGACAACATTCCTTGCATCCGCAAGAA 104970 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 ||| ||||| ||| |||||||| | | ||| | || || | | |||| | Sbjct 104969 GGCTGACTGGGCTTTGAGGTGGATCAGCGACAAGAACAGCACATTCGCCTGCAGGCTTAT 104910 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 || || || || || ||||| ||||| ||| ||||| ||||| ||||||||||||| Sbjct 104909 TGCTTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGTTCATTTGCCTCCATCTTCTGGCT 104850 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| || || |||| | || || ||| ||||||||||||||| | | || || Sbjct 104849 CAAGAAGCGTGGCCTCATGGCAGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGA 104790 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 ||| | |||| || || |||||||| || | | | ||| | ||||| ||| Sbjct 104789 GGGCATGCACACCGACTTCGCCTGCCTTCTTTTCTC---TCACCTCAAGCACAAGCCTGA 104733 Query 26067 TCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126 |||| ||| | |||||| ||||| || | || ||| ||||||| | Sbjct 104732 CCAAGCTCTGGTCGAGTCCATCATCGTCGAGGCCGTCGCTATTGAGCAGGAGTTCCTTAC 104673 Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186 | || ||||| || |||||| |||| ||||| || Sbjct 104672 TGACGCCCTGCCTTGTGCGTTGCTCGGTATGAATGCCAAGCTCATGTGCCAGTACATCGA 104613 Query 26187 GTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAA 26246 || || || |||| ||| || | || || | || | |||| | | |||| Sbjct 104612 GTTCGTTGCAGACCGTCTCCTACTCGCCCTCGGCAACAGCAAGCACTACCATGCCACTAA 104553 Query 26247 CCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAG 26306 ||| |||||||| ||||| ||||| || | | || ||||||||||||||||| ||||| Sbjct 104552 CCCCTTCGACTTCATGGAGAACATTTCCCTCGCTGGCAAGACCAACTTCTTTGAGAAGAG 104493 Query 26307 GGTCGGCGACTATCA 26321 ||||| ||||| || Sbjct 104492 AGTCGGTGACTACCA 104478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838867003840