Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq13 100 1e-16 >seq13 Length=329804 Score = 100 bits (110), Expect = 1e-16 Identities = 195/288 (68%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || | |||||||||||| | || || || | || | || | | |||||| Sbjct 256131 CTTCATGAAGAGATCTGGAATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTC 256072 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 ||||||||| ||||| ||||| | ||| | |||| ||| | |||||||| || | Sbjct 256071 TTTTCCGTGGTTCTTACGGAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAG 256012 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 ||| || ||||| |||| | ||| |||||||| || || || || ||||| | Sbjct 256011 ATATATGGCAAAGGCACCTGGGCGTTTGTTACCACCTTGGTCCACATACCTGGCAGTGTT 255952 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169 ||||| || | ||| || || | ||| | || ||||| || | ||| | Sbjct 255951 GTTGAACACGCGGAGCATGGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTA 255892 Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGC 26217 ||| || || | ||| ||| ||| |||| | ||||||||||||||| Sbjct 255891 GGAGCCAGTTGCTCTGATACGGTGGGCATTCAGACCGATTCCACCAGC 255844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038424114325