Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq468 100 3e-16 >seq468 Length=424542 Score = 100 bits (110), Expect = 3e-16 Identities = 177/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || || |||||||||| || || || || || || || || ||||| || || || || Sbjct 87549 AAAGGCGTGAGATGTTCAGCAACTCCGATGGGTCCAACACCTGGACCACCGCCACCGTGA 87608 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 || |||||||| ||||| || | || ||||| || ||||| || ||| |||| || Sbjct 87609 GGGATACAGAAAGTCTTGTGAAGGTTCAGATGGCACACATCGGCGCCAATCTCACCAGGC 87668 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 ||||| | ||| ||||| | ||||||||||| | || || |||||||| | | Sbjct 87669 GAGCAAAGACCAATCTGAGCATTCATGTTTGCACCATCCATGTACACTTGACCACCGTGG 87728 Query 138342 TCATGAAC--GATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATG 138399 | || || |||| ||| || |||| |||| || | ||||| |||||| | Sbjct 87729 TTGTGGACCAGATCGCACACTTC--CTTGATCTTTGGCTCGTAGACACCGAAAGTCGAAG 87786 Query 138400 GATATGTAATCATAAT 138415 | || || |||||||| Sbjct 87787 GGTAGGTGATCATAAT 87802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578994701647720