Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13 183 4e-41 seq57 91.5 2e-13 seq497 86.0 7e-12 >seq13 Length=329804 Score = 183 bits (202), Expect = 4e-41 Identities = 607/938 (65%), Gaps = 7/938 (1%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 ||||| ||| | || || || |||| | ||| || | || ||||||| | || Sbjct 255544 TACTTCGGTTTTAAGACACTGGAGAGGTCCTACCTCCTGCGTATCGATGGAAAGGTCGCT 255603 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 ||| || ||| ||||| ||||||| || || | || || ||||| || |||||||| Sbjct 255604 GAACGTCCCCAGCACATGATCATGCGTGTTGCTGTGGGTATTCACGGCGAGGACATTGAG 255663 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324 || | ||||| ||| || ||||||| | | ||| |||| ||||| | ||||| Sbjct 255664 AGTGCAATTGAGACGTACAACTTGATGTCCAACAAGTAC-TTCACACACGCCTCTCCAAC 255722 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 |||||||| ||||||||| ||| | | ||| | || |||||||| |||| | || Sbjct 255723 CCTCTTCAGTGCTGGTACCCCACAAGCCCAGCTTGCCTCGTGCTTCCTCATCGATATGAA 255782 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 ||| ||| || | |||||||| | || || | | |||||| ||||| ||| Sbjct 255783 GGATGACAGCATTGATGGTATCTACGACACACTGAAGACGTGTGCCATGATCTCCAAGAA 255842 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||||| || || || || | ||| | | ||||| | | || ||| | || Sbjct 255843 CGCTGGTGGAATCGGTCTGAATGCCCACCGTATCAGAGCAACTGGCTCCTACATTAGCGG 255902 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || || || ||||| | | || ||||| ||||| || ||| ||| || | Sbjct 255903 TACCAACGGCACCTCCAATGGTCTGGTGCCCATGCTCCGCGTGTTCAACAACACTGCCAG 255962 Query 75565 CTATGTAAATCAAGCGGG---GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621 ||||| | |||| || ||| || || | || | || | || ||||| Sbjct 255963 GTATGTGGACCAAGGTGGTAACAAACGCCCAGGTGCCTTTGCCATATATCTCGAGCCATG 256022 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 |||||| ||| | ||| ||||| || | || ||||| || | ||||| | || Sbjct 256023 GCATGCGGATGTTTTGGCCTTCCTGGATCTCCGTAAGAACCACGGAAAAGAAGAAG-TCC 256081 Query 75682 GTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 ||| | || ||||| | |||| ||||||||||| || ||||||||||| || | | Sbjct 256082 GTGCCCGTGACCTCTTCTACGCCCTCTGGATTCCAGATCTCTTCATGAAGCGTGTCCAAG 256141 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 | || ||| |||| | || ||| | || || |||||| | || | | Sbjct 256142 ATAACGGCACCTGGACTCTCATGTGCCCAAATGAGTGCCCTGGTCTCGCTGATGTCTACG 256201 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860 | || || ||||||| || ||| | || || |||||| | | | | ||| | Sbjct 256202 GCGATGAATTTGAAGAGCTTTACGAGAGATACGAGCGTGAGGGTCGCGGCCGCGAGACCG 256261 Query 75861 TACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | |||| | | ||| | || ||||| | | ||||| |||||||||| |||| Sbjct 256262 TTAGAGCCCAAAAGATCTGGTATGCCATTCTAGAGGCCCAGACCGAGACTGGAAACCCAT 256321 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 |||||||||||||| ||| ||| ||||| ||||||||||| | || || ||| Sbjct 256322 TCATGCTTTACAAGGACGCTGCCAACCGTAAGAGCAACCAAAAGAACCTCGGCACCATCC 256381 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 ||||| || || ||||| || || | |||||||| | | |||||| || || | Sbjct 256382 GCAGCTCCAACCTCTGCACCGAGATCATTGAGTACACTGCTCCCGATGAGGTTGCCGTCT 256441 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAAT 76078 | || | || || || || || || | |||||| || Sbjct 256442 GTAACCTTGCCTCTATTGCGCTGCCGACCTATGTCGAT 256479 >seq57 Length=303147 Score = 91.5 bits (100), Expect = 2e-13 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||||||||| ||||| || | ||| | ||| || ||||| || ||||| | Sbjct 23363 GGCGCCAAGATCCCTCGAGGTGCAATCCTCTCCGGTCCCCCTGGTACTGGTAAGACTTTG 23422 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 ||||| ||| | || || |||||| || || ||| || | ||| |||| | | Sbjct 23423 CTCGCGAAAGCAACTGCTGGAGAATCAGGGGTACCGTTCTTCTCGGTG-TCTGGATCTGA 23481 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 || ||||||||||| || ||||| || | | | || || ||| | |||| | || Sbjct 23482 ATTCGTGGAGATGTTCGTCGGTGTTGGCCCTTCACGTGTGCGAGATTTGTTTGCTAATGC 23541 Query 175455 CCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG 175509 | ||||| || ||| ||||| | ||||| ||||||||||||||| | |||||| Sbjct 23542 GAG-GAAAAACACACCTTGTATCATTTTCATCGATGAGATTGATGCGATAGGCAAG 23596 >seq497 Length=111328 Score = 86.0 bits (94), Expect = 7e-12 Identities = 290/442 (66%), Gaps = 16/442 (4%) Strand=Plus/Minus Query 65083 CTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTAT 65142 ||| |||| || || || ||||||||||||||||| || ||||| | | || | Sbjct 104914 CTTATTGCTTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGTTCATTTGCCTCCATCTTC 104855 Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGA 65202 ||| | |||||||| || |||||| |||| || |||||| || || || || ||||| Sbjct 104854 TGGCTCAAGAAGCGTGGCCTCATGGCAGGTCTCACCTTCTCCAACGAGCTCATCTCCCGT 104795 Query 65203 GATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT-TTGCGTAATAGACC 65261 |||||||| | ||| || || ||| || |||| || | | | | || | Sbjct 104794 GATGAGGGCATGCACACCGACTTCGCC-TG----CCTTCTTTTCTCTCACCTCA-AGCAC 104741 Query 65262 CA--CTACCGAAACT---ATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGG 65316 | || | || || || | ||||| | ||||| || | |||||| | | | Sbjct 104740 AAGCCTGACCAAGCTCTGGTCGAGTCCATCATCGTCGAGGCCGTCGCTATTGAGCAGGAG 104681 Query 65317 TTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAG 65376 ||| | ||||| || || ||| | |||||||||| | || |||| | || Sbjct 104680 TTCCTTACTGACGCCCTGCCTTGTGCGTTGCTCGGTATGAATGCCAAGCTCATGTGCCAG 104621 Query 65377 TACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGC--CACCCATTTGGA 65434 ||||| |||| || | || |||||||| | | | || | || || | Sbjct 104620 TACATCGAGTTCGTTGCAGACCGTCTCCT-ACTCGCCCTCGGCAACAGCAAGCA-CTACC 104563 Query 65435 ACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCT 65494 | || | || || || ||||| ||||| |||||| ||| | ||| ||||||||||||| Sbjct 104562 ATGCCACTAACCCCTTCGACTTCATGGAGAACATTTCCCTCGCTGGCAAGACCAACTTCT 104503 Query 65495 TTGAGAAGCGAGTTGGGGACTA 65516 |||||||| |||| || ||||| Sbjct 104502 TTGAGAAGAGAGTCGGTGACTA 104481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565789411680