Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq445 495 5e-135 seq246 181 1e-40 seq35 143 4e-29 seq46 127 3e-24 seq1 125 9e-24 >seq445 Length=483212 Score = 495 bits (548), Expect = 5e-135 Identities = 1078/1602 (67%), Gaps = 20/1602 (1%) Strand=Plus/Minus Query 195286 CATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATG 195345 || |||| ||| ||||| ||||||||| | || || || ||||| || || ||| | | Sbjct 442278 CACAATGGCTCCCGCTATCGGTATCGATCTGGGTACCACCTACTCTTGCGTGGGTATCTT 442219 Query 195346 GCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTA 195405 | |||| || | ||||| ||| | || ||||| || ||||| ||||| || || | Sbjct 442218 CAGAGATGACCGCATCGAGATCATCGCCAACGACCAGGGTAACCGCACAACCCCTTCCTT 442159 Query 195406 CGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTAT 195465 ||| ||||| || || | || |||||| | || |||||||| || || ||| || || Sbjct 442158 CGTCGCCTTCACCGACACAGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCAT 442099 Query 195466 GAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAA 195525 |||||| ||| || ||||| || || |||||||| || || | ||||| | || Sbjct 442098 GAACCCGGCCAACACCGTCTTCGATGCCAAGCGTCTCATCGGCAGGAAGTTCACCGACTC 442039 Query 195526 GAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAA 195585 | ||||| || || ||| ||| ||| | ||| | || | | |||| || Sbjct 442038 CGAGGTCCAGTCAGACATGAAGCACTTCCCTT-TCAAGATCATCGAGAAG--GCTGGCAA 441982 Query 195586 GCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTC 195645 |||| | || | || ||||| | || ||| | || || | ||||| |||||||| Sbjct 441981 GCCTGTCATACAAGTGGAATTCCGTGGAGAGGACAAGACTTTCACGCCCGAGGAAATTTC 441922 Query 195646 GTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAA 195705 ||||| | | | || |||| ||||||||| ||| | | |||| | ||| || || Sbjct 441921 TGCTATGATTCTCACGAAAATGAGGGAGACTGCCGAAGCCTATTTGGGCACAACCGTCAA 441862 Query 195706 AGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACG-ACAGGCGACAAAGG 195764 | || || || || |||||||| ||||||| ||| || || |||| | || |||| Sbjct 441861 CAACGCTGTGGTCACCGTACCTGCCTACTTCAATGACAGCCAGCGCACAGCC-ACCAAGG 441803 Query 195765 ACGCTGCTGCT--ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGC 195822 | || | ||| ||||| || | ||| ||| |||| || || || || || || || Sbjct 441802 ATGCAG--GCTTGATTGCAGGCTTGAACGTTCTGCGAATCATTAACGAGCCTACGGCTGC 441745 Query 195823 TGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGA 195882 || ||||| || ||||| |||||||| | || | ||| || || ||||||| || Sbjct 441744 CGCCATTGCGTACGGTCTCGACAAGAAGACTGAGGGAGAGCGCAACGTCCTGATCTTCGA 441685 Query 195883 TCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGT 195942 | | |||||||| || || ||||| || || | | || || | || || ||||| || Sbjct 441684 TTTGGGTGGTGGCACTTTCGATGTGTCGCTCTTGACGATCGAGGAGGGCATCTTCGAGGT 441625 Query 195943 AAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCG 196002 ||| | ||||| ||||||||||| || |||||||| || |||||| || || || Sbjct 441624 CAAGTCCACTGCCGGTGATACTCACCTGGGTGGTGAGGACTTCGATAACCGCCTCGTCAA 441565 Query 196003 TCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGG 196061 ||| ||||| | || ||| || || ||||||||| | || ||| || | | Sbjct 441564 TCACTTTGT-ACAGGACTTCAAGCGCCGTAACAAGAAAGATTTGACTACAAACGCTCGTG 441506 Query 196062 CTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTC 196121 | |||||||| || | || || || || |||||||| || || ||||||||| | || | Sbjct 441505 CGCTTCGTCGTCTGCGCACCGCCTGCGAGCGTGCCAAGCGTACCCTCTCTTCTTCCGCCC 441446 Query 196122 AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181 | || | |||||||||| || | || || || | |||| ||| || | || |||| Sbjct 441445 AGACCTCGATTGAGATTGACTCTCTCTTCGAAGGTGTCGACTACTACACCTCCATCACCC 441386 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAAC 196241 |||| ||||| || ||| | ||| | || | ||||| || || || | Sbjct 441385 GTGCTCGTTTCGAGGAGCTGTGTCAGGATCTCTTCCGTGGCACCATGGAGCCAGTCGAGC 441326 Query 196242 AAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAG 196301 || || || |||||||| || ||||| || | || || |||||||| |||| Sbjct 441325 GCACTCTCCGCGATGCAAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTTGTCGGAG 441266 Query 196302 GATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATT 196361 | || |||||||| || ||||| || || || || ||||||||| || || Sbjct 441265 GTTCTACCCGTATCCCCAAGATCCAGAAGCTGGTTAGCGACTTCTTCAACGGAAAGGAGC 441206 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTA 196421 ||||| | |||||||| || || || ||||| || ||||| ||||| ||||| |||| Sbjct 441205 CAAACAGGTCCATCAACCCTGACGAGGCTGTTGCGTACGGTGCTGCCGTCCAGGCCGCTA 441146 Query 196422 TTCTCTCAGGTGTTGACAATAATAACGTCCA------AGATCTTCTGCTACTTGATGTTG 196475 | || || |||| ||| | | ||||| ||||| ||| | | ||||| | Sbjct 441145 TCCTTTCTGGTG-ACACATCCAGCAAGTCCACCAACGAGATCCTCT--TGTTGGATGTCG 441089 Query 196476 CACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGA 196535 | || | || || ||| | || || || |||||||| |||||| | || | | | Sbjct 441088 CGCCTTTGTCTCTCGGTATCGAGACTGCCGGTGGTGTCATGACTCCCTTGATCAAGCGCA 441029 Query 196536 ACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAG 196595 |||| || || || || |||||| | ||||| || || | |||| || || || | Sbjct 441028 ACACCACCATCCCTACCAAGAAGTCGGAGGTCTTCTCCACTTTCGCCGACAACCAGCCTG 440969 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTG 196655 |||| | || || || | ||| || || || |||| | ||||| ||| | || |||| Sbjct 440968 GTGTCCTGATCCAGGTCTTTGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTTG 440909 Query 196656 GAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTT 196715 ||| || || || | || |||||| | || || | |||||||| ||||| | || Sbjct 440908 GAAAGTTTGAGCTGTCTGGCATTCCACCAGCTCCTCGTGGTGTTCCTCAGATCGAGGTCA 440849 Query 196716 GCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCA 196775 ||||||| | || || || || || | |||||| | || || |||| | |||||| Sbjct 440848 CCTTCGATTTGGATGCCAACGGCATCATGAACGTCTCTGCCCTTGAGAAGGGTACTGGCA 440789 Query 196776 AATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAAC 196835 | | | ||||| || || ||||| |||||||| || || |||||||| || || | Sbjct 440788 AGACCAACAAGATCGTCATCACCAACGACAAGGGTCGCCTCAGCAAGGAGGAGATCGAGC 440729 Query 196836 GTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||||| | || || || ||||||| || || || |||| Sbjct 440728 GTATGTTGGCTGAGGCCGAGAAGTACAAGGCTGAGGATGAGG 440687 >seq246 Length=221927 Score = 181 bits (200), Expect = 1e-40 Identities = 180/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| || ||||| || |||||||| || || ||| Sbjct 103317 GTGGTATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCCTGGAAGTGGAGA 103258 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||||||| ||||| ||| |||| | ||||| ||||| ||||||||||| ||||| | Sbjct 103257 GCTCAGACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAAGGCATCCCACCAG 103198 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || || |||||||| ||||| || || || |||||||| | |||| Sbjct 103197 ACCAGCAGAGATTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCGGATT 103138 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||| || || |||||||| || || | || |||||| Sbjct 103137 ACAACATTCAGAAGGAGAGCACACTCCACCTTGTCCTCAGATTGCGCGGTGGT 103085 Score = 178 bits (196), Expect = 2e-39 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||||||||| || || |||||||||||||| |||| Sbjct 103545 GTGGTATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGT 103486 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| || | || ||||||| || || ||||| || || ||||| | Sbjct 103485 CTTCCGACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCAG 103426 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| ||| | || || ||||| || || || || ||||| || |||||| | || | Sbjct 103425 ACCAGCAGCGATTGATCTTCGCTGGCAAGCAACTCGAGGATGGTCGCACCCTCTCAGACT 103366 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| | || |||||||| || || ||||| || || | ||||| |||||| Sbjct 103365 ACAATATCCAGAAGGAGTCCACCCTCCACCTCGTCCTTCGTCTTCGTGGTGGT 103313 Score = 165 bits (182), Expect = 1e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || ||||| || ||||| ||||| || ||||| ||||| ||| | || || Sbjct 103744 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTAAAGTCC 103685 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || |||||||||||||| || || ||||| || ||||| |||||||| || Sbjct 103684 AAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAGCAGCGTCTTATCTTTGCTGGAAAG 103625 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || |||||||| || || ||||| | || |||||| | || |||||||| ||||| ||| Sbjct 103624 CAACTTGAAGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 103565 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | ||||| |||||| Sbjct 103564 CTCGTCCTTCGTCTTCGTGGTGGT 103541 Score = 149 bits (164), Expect = 8e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || || || || || || |||||||| || || ||| Sbjct 103089 GTGGTATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTGGAGA 103030 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||||||| ||||| ||| |||| | ||||| ||||| |||||||||||||| || | Sbjct 103029 GCTCAGACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAAGGCATTCCCCCAG 102970 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || ||||| || || || ||| | || || || | || || | || | Sbjct 102969 ACCAGCAGCGTCTCATTTTCGCAGGCAAGCAGTTGGAGGACGGCAGGACACTGTCAGACT 102910 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||| ||||| ||| | || || || ||||| ||||| Sbjct 102909 ACAACATCCAGAAGGAGAGCACTCTCCACTTGGTGCTGAGACTTCGTGGTGG 102858 >seq35 Length=320448 Score = 143 bits (158), Expect = 4e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || ||||| |||||||||||||||||||| || ||||| ||||| || |||| || Sbjct 216079 ACGGGTAAAACCATCACCCTCGAGGTTGAGTCTTCGGACACCATCGACAATGTCAAGTCC 216138 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| || || ||||| || ||||| || | || || || || || Sbjct 216139 AAGATCCAGGACAAGGAGGGTATCCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAG 216198 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || ||||||||| | || |||||| | || |||||| || || ||| Sbjct 216199 CAGCTCGAGGACGGTCGTACCCTCTCGGACTACAACATCCAGAAGGAGAGCACCCTTCAC 216258 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 216259 CTGGTCCTGCGCCTGCGTGGTGGT 216282 >seq46 Length=304048 Score = 127 bits (140), Expect = 3e-24 Identities = 237/346 (68%), Gaps = 3/346 (1%) Strand=Plus/Plus Query 195642 TTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTG 195701 |||| || ||| | || ||||||||||||| || || || | | | || | | Sbjct 73570 TTTCTTCCATGATCCTGGGTAAGATGAAGGAGGTCGCCGAGTCGTACCTCGGCGAGGAGG 73629 Query 195702 TGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAA 195761 | || | || ||||| || || || || ||||||| || | || || || || | Sbjct 73630 TCAAGCACGCGGTTGTCACCGTTCCAGCCTACTTCAACGACGCCCAGCGTGCCGCAACCA 73689 Query 195762 AGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGG 195821 ||||||| | | || || ||||| ||| ||| | || |||| ||||| || || | Sbjct 73690 AGGACGCAGGCACAATCGCCGGTCTTAACGTTCTGCGTGTTGTCAACGAACCCACCGCCG 73749 Query 195822 CTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTG 195881 | || | || ||||| || ||||||| | | | ||| | | |||| ||| | Sbjct 73750 CCGCTCTCGCCTATGGCCTCGACAAGACCGACCAGGAACGCCAGATC--ATTG-TCTACG 73806 Query 195882 ATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAG 195941 |||| ||||||||||| || |||||||| |||| | | | || ||| | ||||| | Sbjct 73807 ATCTTGGTGGTGGTACTTTCGATGTCTCCATTCTGACTGTCGACCAGGGTGTTTTCGAGG 73866 Query 195942 TAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | |||||||||||||||| ||||| || |||||||| |||||||| Sbjct 73867 TCCAGGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGATTTCGA 73912 >seq1 Length=637933 Score = 125 bits (138), Expect = 9e-24 Identities = 194/274 (71%), Gaps = 5/274 (2%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| ||||||| || || | ||| | || |||||||||| ||| || Sbjct 177813 ACCGTGCCTGCCTACTTCAACGACAACCAGAGGCAGTCCACCAAGGACGCTGGTGCCATC 177872 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || || || || || || ||||| || ||| Sbjct 177873 GCCGGCCTCAACGTTCTCCGTATCATCAACGAGCCCACTGCCGCCGCCATTGCCTACGGT 177932 Query 195839 CT-GGACAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTTGATCTCGGTGGTGG 195894 || || | | ||| ||| | | || || |||||| |||||||||||||| Sbjct 177933 CTTGGTGCCGGA-AAGTCCGAGAAGGAGCGCAACGTTCTGATCTACGATCTCGGTGGTGG 177991 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| || |||||||| || ||| | || | |||||| | ||| || ||||| ||||| Sbjct 177992 TACCTTCGATGTCTCCCTCCTCCACATCCAGGGTGGTGTCTTCACCGTCAAGGCCACTGC 178051 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 |||||| ||||| || |||||| | || |||||| Sbjct 178052 TGGTGACACTCACCTTGGTGGTCAGGACTTCGAT 178085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858197903920