Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq246 100 2e-16 >seq246 Length=221927 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || ||||| ||| | || ||||| ||||| ||| | ||| |||| ||| Sbjct 103084 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTGGAGAGCTCA 103025 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || || |||||| || || |||||| | ||| || || Sbjct 103024 -GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCA 102966 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || |||| || || || ||| ||||||||| || ||| || | |||||||| Sbjct 102965 GCAGCGTCTCATTTTCGCAGGCAAGCAGTTGGAGGACGGCAGGACACTGTCAGACTACAA 102906 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 ||| || |||||| || | ||| ||||| ||||| | || || ||| Sbjct 102905 CATCCAGAAGGAGAGCACTCTCCACTTGGTGCTGAGACTTCGTGGTGGA 102857 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || ||||| || | || || || ||||| ||| | ||| |||| ||| Sbjct 103312 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCCTGGAAGTGGAGAGCTCA 103253 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || || |||||| || || |||||| | || || || Sbjct 103252 -GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAAGGCATCCCACCAGACCA 103194 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||||| | || | || ||||| ||||||||||||| | || || |||| ||||| Sbjct 103193 GCAGAGATTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCGGATTACAA 103134 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||| |||||| || | ||| | || | |||||||| || || Sbjct 103133 CATTCAGAAGGAGAGCACACTCCACCTTGTCCTCAGATTGCGCGGTGG 103086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874315870079