Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq507 118 4e-21
seq13 86.0 2e-11
>seq507
Length=98241
Score = 118 bits (130), Expect = 4e-21
Identities = 153/205 (75%), Gaps = 6/205 (3%)
Strand=Plus/Minus
Query 309643 ACCCTCTCGCCCCTCAA-AGCTCCAACCTTCGATGCGACAATCTCCATCAACTTGGCGAT 309701
|||||||| || || | ||| || ||||| || | | ||| | ||| | ||| ||
Sbjct 36072 ACCCTCTCTACCGTCGATAGCACCGACCTTGGAAAGAAGACACTCGACCAAATGGGCAAT 36013
Query 309702 AGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTGAT 309761
||||||||||||||||||||| |||||||||| | ||||||||| | | ||| ||
Sbjct 36012 AGTCATACGAGAAGGAATGGCGTGAGGGTTGATAATGATGTCAGGTGTAAGTCC-CTG-- 35956
Query 309762 TGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGAGCGT 309820
| | |||| ||||||||||||| | |||| | | |||||| || ||||| ||| |||
Sbjct 35955 GGCGGTGAATGGCATATCTTCTTGACGGTA-GGTGATACCAATGGTACCCTTCTGACCGT 35897
Query 309821 GCCTGGAAGCAAACTTGTCACCAAT 309845
| | || || ||||||||||||||
Sbjct 35896 GACGCGAGGCGAACTTGTCACCAAT 35872
>seq13
Length=329804
Score = 86.0 bits (94), Expect = 2e-11
Identities = 91/119 (76%), Gaps = 1/119 (1%)
Strand=Plus/Minus
Query 160046 GAGCCAAG-TTGCAGGAGGCAAACTCATTCTTATCGCTGTATTCAATGATTTCGGTGCAG 160104
||| |||| || ||| ||||| ||||| | | |||| |||||||| |||||||||
Sbjct 256454 GAGGCAAGGTTACAGACGGCAACCTCATCGGGAGCAGTGTACTCAATGATCTCGGTGCAG 256395
Query 160105 AGGTTGCTTCTCTCGATGATTCCGAGGTTCTTTTGGTTGCTTTTGAAGTTGGCCGCGTC 160163
|||||| || |||| | |||||||||||||||||||| || |||||| |||||
Sbjct 256394 AGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTACGGTTGGCAGCGTC 256336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951961620057608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |