Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq507 118 4e-21 seq13 86.0 2e-11 >seq507 Length=98241 Score = 118 bits (130), Expect = 4e-21 Identities = 153/205 (75%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 309643 ACCCTCTCGCCCCTCAA-AGCTCCAACCTTCGATGCGACAATCTCCATCAACTTGGCGAT 309701 |||||||| || || | ||| || ||||| || | | ||| | ||| | ||| || Sbjct 36072 ACCCTCTCTACCGTCGATAGCACCGACCTTGGAAAGAAGACACTCGACCAAATGGGCAAT 36013 Query 309702 AGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTGAT 309761 ||||||||||||||||||||| |||||||||| | ||||||||| | | ||| || Sbjct 36012 AGTCATACGAGAAGGAATGGCGTGAGGGTTGATAATGATGTCAGGTGTAAGTCC-CTG-- 35956 Query 309762 TGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGAGCGT 309820 | | |||| ||||||||||||| | |||| | | |||||| || ||||| ||| ||| Sbjct 35955 GGCGGTGAATGGCATATCTTCTTGACGGTA-GGTGATACCAATGGTACCCTTCTGACCGT 35897 Query 309821 GCCTGGAAGCAAACTTGTCACCAAT 309845 | | || || |||||||||||||| Sbjct 35896 GACGCGAGGCGAACTTGTCACCAAT 35872 >seq13 Length=329804 Score = 86.0 bits (94), Expect = 2e-11 Identities = 91/119 (76%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 160046 GAGCCAAG-TTGCAGGAGGCAAACTCATTCTTATCGCTGTATTCAATGATTTCGGTGCAG 160104 ||| |||| || ||| ||||| ||||| | | |||| |||||||| ||||||||| Sbjct 256454 GAGGCAAGGTTACAGACGGCAACCTCATCGGGAGCAGTGTACTCAATGATCTCGGTGCAG 256395 Query 160105 AGGTTGCTTCTCTCGATGATTCCGAGGTTCTTTTGGTTGCTTTTGAAGTTGGCCGCGTC 160163 |||||| || |||| | |||||||||||||||||||| || |||||| ||||| Sbjct 256394 AGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTACGGTTGGCAGCGTC 256336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951961620057608