Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq13 188 7e-43 seq246 138 1e-27 seq35 96.9 3e-15 >seq13 Length=329804 Score = 188 bits (208), Expect = 7e-43 Identities = 1105/1739 (64%), Gaps = 55/1739 (3%) Strand=Plus/Minus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTTATCTTCAT 148117 |||||||||||| || ||||||||||||||||| | |||| || |||| | | Sbjct 257226 CTGGTCAATGAAAGCACCACGGTCAGCGGCCATCTGGATGATGGTACGCTGGCTG---AG 257170 Query 148118 CTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177 |||||| | |||||||||| ||||| || ||| || ||| | |||||| || || Sbjct 257169 CTCCCACACAGTCTTGTACAATGCCTTGAGATCATCTGGGATGTTGGGGATGCGTTGGAC 257110 Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237 |||||| | | || | || | || ||| | ||| | | | | |||| Sbjct 257109 CGAGCCACCATCAGCGATGATTCGGTTCTTCATGTTGTCACTCCACAAACCACGTTCGAC 257050 Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297 || || | || || | | || || || || ||||| || || ||||| || ||| Sbjct 257049 GAGATCCTTGAGTAGCCAGGGGTTGACAACTTGGAACTCACCCGCAAGCACACGGCGCGA 256990 Query 148298 ATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357 ||| | |||||| || | ||||| || | |||||| |||| ||||| | ||||| Sbjct 256989 ATAGATGTTGCTTGTGTATGGTTCGAAGCATTCGTTGAATCCCATGATCTGGGAGGTCGA 256930 Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417 || || ||||| || || || || ||||| |||| |||| | || | | | || Sbjct 256929 AGCAGTTGGCATTGGGGCAACGAGGAGAGAGTTACGCACACCG-GTTTGCGCAATCTTCG 256871 Query 148418 CTTC-AGAGCCGCCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACATGTCGTACTG 148474 ||| || || ||||| ||||| || | | | |||| ||| |||||||||||| || Sbjct 256870 CTTTGAGGGCAGCCCAATCCCAAAGATCAGTGGGGGTGACACC--CCACATGTCGTATTG 256813 Query 148475 CAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCG 148533 || || | | || | || ||| ||||| | ||| || || || | | Sbjct 256812 AAGCTCACC-CTTCGAGACAGGTGAGCCTTCGTAGGTCTCGTAAGGACCAAGCTTTTCAG 256754 Query 148534 CCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 | || |||| ||| | ||| ||| ||| || |||||| ||||| |||||| Sbjct 256753 CGAGATCGCTAGACGCGGTCAAAGCGGCGTGGTAGATAGTCTCGAAGATTTGGATGTTGA 256694 Query 148594 GCAGCGCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGG 148652 || | || | | | ||| | ||||| ||||| | || || || || | Sbjct 256693 GCTG-GCGTGCTTCAGGAGAGTCGAATGGCATGCGCAGGGCGAGGAAAGCATCTGCCAAA 256635 Query 148653 CCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC 148712 || | || || | ||||| || ||||| | |||| ||| || ||| | | Sbjct 256634 CCATTGACACCAAGACCAATCGGACGGTGGCGGAAGTTGCCCTTGCGAGC-CTCAGGTAC 256576 Query 148713 -GGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTC 148770 || || | |||| || |||||||||| |||| || | || |||| || | | Sbjct 256575 AGGGTATTTGTTGACCTCAATGATCTTGTTCAAGTTTCTGGTA-ACGACCTGGGTTACTT 256517 Query 148771 TGCGCAGC------AATTCAAAA---TCGTACTTGTCATCTACGATGCATCGGTTCACGG 148821 | | ||| || ||||| || | || | ||| || || |||| || | Sbjct 256516 CGTGGAGCTTCTTGAAGTCAAATCGCTCATTCTGGATATCGAC-ATAGGTCGG--CAGCG 256460 Query 148822 CGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGG 148881 | |||||||| || || || ||||| |||||| || || ||||||| | |||||||| Sbjct 256459 CAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGAGCAGTGTACTCAATGATCTCGG 256400 Query 148882 CGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACG 148941 ||| || ||| || ||| ||| | ||||||||| |||||||| | |||| | Sbjct 256399 TGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTACGGTTGGCAG 256340 Query 148942 CGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCG-A 149000 |||||||||| |||||| | || ||||| || ||| | || ||| ||| | | Sbjct 256339 CGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTCTGGG---CCTCTA-GAATGGCA 256284 Query 149001 T-GCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTA 149057 | ||| || || || | || || | ||||||||| |||||||| Sbjct 256283 TACCAGATCTTTTGGGCTCTAACGGTCTCGCGGCCGCGACCCTCACGCTCGTATCTCTCG 256224 Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117 || ||| || || | ||||||||| ||| ||||||| ||||||| | |||||| Sbjct 256223 TAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCACTCATTTGGGCAC 256164 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 ||||| | ||| ||||| | | || |||||||| || ||||| || | |||||| Sbjct 256163 ATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAGATCTGGAATCCAGAGG 256104 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237 ||||| | |||||| || || | ||||| || ||| || || | || Sbjct 256103 GCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTTACGGAGATCCAGG 256044 Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG 149297 | | || | ||||| ||||| ||||| | || | || | || || ||| ||| Sbjct 256043 AAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGCACCTGGGCGTTTG 255984 Query 149298 ---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354 || || ||||| || | | | ||||||| ||||| || | ||| || | | Sbjct 255983 TTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACGCGGAGCATGGGCACCAGA 255924 Query 149355 CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACG 149414 ||| ||| |||||||| ||| ||||||| ||| |||| | ||| | Sbjct 255923 CCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTTGCTCTGATACGGTGGGCA 255864 Query 149415 TTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTA 149473 || | ||||| || || ||| ||| ||||| || || ||| | || || ||| Sbjct 255863 TTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGCACACGTCTTC-AGTGTGTCGTA 255805 Query 149474 GATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAA 149533 ||| || || |||||||| |||||| | || ||||||||| | || | Sbjct 255804 GATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGCACGAGGCAAGCTGGGCTTG 255745 Query 149534 ACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCAT 149593 | || || || ||| | ||| || ||||||||| || || || | | ||||| Sbjct 255744 TGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAGTACTTGTTGGACATCAA 255685 Query 149594 CTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 | ||||| ||| | |||| | || ||||| ||||| || || || | || || ||| Sbjct 255684 GTTGTACGTCTCAATTGCACTC--TCAATGTCCTCGCCGTGAATACCCACAGCAACACGC 255627 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTTTGAGCAAGTAGCCG 149708 || | ||| ||||| || || || || || |||||| || || | |||| Sbjct 255626 ATGATCATGTGCTGGGGACGTTCAGCGAC---CTTTCCATCGATACGCAGGAGGTAGGAC 255570 Query 149709 TTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 | || |||||||| | || ||||| | ||||| || || ||| ||| | |||| || Sbjct 255569 CTCTCCAGTGTCTTAAAACCGAAGTATTGGTAGTTGAAATCACGGTCGTAGACAATAGC 255511 >seq246 Length=221927 Score = 138 bits (152), Expect = 1e-27 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| | ||||||||| ||| ||||||| ||||||||||| || || ||||||||||| Sbjct 102929 GTCCTCCAACTGCTTGCCTGCGAAAATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTT 102988 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||||| ||||| | || | ||||| | | |||||| || | ||||| Sbjct 102989 GTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCTGAGCTCTCCACTTCCAGGGTGAT 103048 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| || ||||| |||||||| Sbjct 103049 GGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 103084 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| |||||||| || | ||| ||| | |||||||| ||||||| Sbjct 103343 GGTGGACTCCTTCTGGATATTGTAGTCTGAGAGGGTGCGACCA-TCCTCGAGTTGCTTGC 103401 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||||||||| || ||||| || |||||||| |||||| || Sbjct 103402 CAGCGAAGATCAATCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGACT 103461 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||||| | |||||| |||| ||||| ||| ||||| || || | Sbjct 103462 TCACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGG 103521 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 103522 TCTTGACGAAGATCTGCAT 103540 Score = 114 bits (126), Expect = 1e-20 Identities = 143/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCG 133526 ||| ||||| || |||||||| || || ||| |||||| |||||||| || ||| Sbjct 103121 CTCCTTCTGAATGTTGTAATCCGACAGGGT--ACGGCCGTCCTCCAGCTGCTTACCAGCG 103178 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | || | | ||||||||| || ||||||||||||||||| ||||||| ||||| Sbjct 103179 AAGATCAATCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATCTTTGACTTGACG 103238 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | || | ||||| | | |||||| || | ||||| ||| || ||||| || || || Sbjct 103239 TTGTCGATGGTGTCTGAGCTCTCCACTTCCAGGGTGATGGTCTTTCCGGTGAGGGTCTTG 103298 Query 133647 ACGAAAATCTGCAT 133660 ||||| |||||||| Sbjct 103299 ACGAAGATCTGCAT 103312 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| ||| | ||| ||| || || ||||| || Sbjct 103572 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGTTGCTTTCCA 103631 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || ||||||||||| ||||| |||||||||||||| |||||| ||| Sbjct 103632 GCAAAGATAAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTT 103691 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | || | ||||| | || ||| || || | |||| ||| |||||||| Sbjct 103692 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 103744 >seq35 Length=320448 Score = 96.9 bits (106), Expect = 3e-15 Identities = 128/176 (73%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 |||| ||| ||||| || ||||| || | | | | |||| |||||||||||||||| Sbjct 216252 GGTGCTCTCCTTCTGGATGTTGTAGTC--CGAGAGGGTACGACCGTCCTCGAGCTGCTTG 216195 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || | ||||||||||| || ||||| || |||||||| |||||| | Sbjct 216194 CCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTGGAC 216135 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 |||| | || | ||||| | | ||| || |||| ||||| |||||| || || Sbjct 216134 TTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTACCCGT 216079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417712149640