Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq13 152 1e-31 >seq13 Length=329804 Score = 152 bits (168), Expect = 1e-31 Identities = 223/315 (71%), Gaps = 3/315 (1%) Strand=Plus/Plus Query 110681 TGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG 110740 ||| || || || ||| | | || |||||| ||||||| | |||||| | |||||||| Sbjct 255921 TGGTCTGGTGCCCATGCTCCGCGTGTTCAACAACACTGCCAGGTATGTGGACCAAGGTGG 255980 Query 110741 TAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGA 110797 ||| | | || | ||||| || |||||||| || |||||| | ||| | || | Sbjct 255981 TAACAAACGCCCAGGTGCCTTTGCCATATATCTCGAGCCATGGCATGCGGATGTTTTGGC 256040 Query 110798 ATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTA 110857 ||| | || || ||||| || || ||| |||||| | || ||||| | || || Sbjct 256041 CTTCCTGGATCTCCGTAAGAACCACGGAAAAGAAGAAGTCCGTGCCCGTGACCTCTTCTA 256100 Query 110858 TGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCT 110917 || | |||||| ||||| | |||||||| ||||| ||||| || |||| ||| |||| Sbjct 256101 CGCCCTCTGGATTCCAGATCTCTTCATGAAGCGTGTCCAAGATAACGGCACCTGGACTCT 256160 Query 110918 TATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCT 110977 ||||| || || | |||||||| ||||||| || || | || |||||||| || Sbjct 256161 CATGTGCCCAAATGAGTGCCCTGGTCTCGCTGATGTCTACGGCGATGAATTTGAAGAGCT 256220 Query 110978 TTACGAAAAATATGA 110992 |||||| | ||| || Sbjct 256221 TTACGAGAGATACGA 256235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186805029714071