Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq246 98.7 7e-16 >seq246 Length=221927 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || ||||||||||| || || |||||||| || || ||||| | |||| || Sbjct 102875 CACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGACAGTGTCCTGCCGTCCTC 102934 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 ||| || || || || ||||| | ||||||||| ||| | || | ||||| ||||| Sbjct 102935 CAACTGCTTGCCTGCGAAAATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTG 102994 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCG 33715 || || || | || | ||| | |||||| ||| ||||| || | ||||| | Sbjct 102995 GATCTT-TGACTTGACGTTGTCGATGGTGTCTGAGCT---CTCCACTTCCAGGGTGATGG 103050 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || | || || || |||||||||||| Sbjct 103051 TCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATA 103085 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || || ||||| || ||||| ||||| | || || | ||| Sbjct 103338 TGGAGGGTGGACTCCTTCTGGATATTGTAGTCTGAGAGGGTGCGACCATCCTCGAGTTGC 103397 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || ||||| |||||||| ||| | || | ||| || ||||| || || Sbjct 103398 TTGCCAGCGAAGATCAATCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTG 103457 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| ||| ||| | ||||||| || ||||| || | ||||| || || || || Sbjct 103458 GACTTCA-CATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 103516 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 103517 AAGGGTCTTGACGAAGATCTGCATA 103541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701952893120